ID I1H8J9_BRADI Unreviewed; 456 AA.
AC I1H8J9;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=serine--tRNA ligase {ECO:0000256|ARBA:ARBA00012840};
DE EC=6.1.1.11 {ECO:0000256|ARBA:ARBA00012840};
DE AltName: Full=Seryl-tRNA synthetase {ECO:0000256|ARBA:ARBA00031113};
GN Name=100833118 {ECO:0000313|EnsemblPlants:KQK23100};
GN ORFNames=BRADI_1g71300v3 {ECO:0000313|EMBL:KQK23101.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQK23101.1};
RN [1] {ECO:0000313|EMBL:KQK23101.1, ECO:0000313|EnsemblPlants:KQK23100}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK23101.1,
RC ECO:0000313|EnsemblPlants:KQK23100};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK23101.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK23101.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK23100}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK23100};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000880; KQK23100.1; -; Genomic_DNA.
DR EMBL; CM000880; KQK23101.1; -; Genomic_DNA.
DR EMBL; CM000880; KQK23102.1; -; Genomic_DNA.
DR RefSeq; XP_003558579.1; XM_003558531.3.
DR AlphaFoldDB; I1H8J9; -.
DR STRING; 15368.I1H8J9; -.
DR EnsemblPlants; KQK23100; KQK23100; BRADI_1g71300v3.
DR EnsemblPlants; KQK23101; KQK23101; BRADI_1g71300v3.
DR EnsemblPlants; KQK23102; KQK23102; BRADI_1g71300v3.
DR GeneID; 100833118; -.
DR Gramene; KQK23100; KQK23100; BRADI_1g71300v3.
DR Gramene; KQK23101; KQK23101; BRADI_1g71300v3.
DR Gramene; KQK23102; KQK23102; BRADI_1g71300v3.
DR KEGG; bdi:100833118; -.
DR eggNOG; KOG2509; Eukaryota.
DR HOGENOM; CLU_023797_0_1_1; -.
DR InParanoid; I1H8J9; -.
DR OMA; MNDSACL; -.
DR OrthoDB; 239638at2759; -.
DR Proteomes; UP000008810; Chromosome 1.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004828; F:serine-tRNA ligase activity; IBA:GO_Central.
DR GO; GO:0000049; F:tRNA binding; IBA:GO_Central.
DR GO; GO:0006434; P:seryl-tRNA aminoacylation; IBA:GO_Central.
DR CDD; cd00770; SerRS_core; 1.
DR Gene3D; 1.10.287.40; Serine-tRNA synthetase, tRNA binding domain; 1.
DR InterPro; IPR002314; aa-tRNA-synt_IIb.
DR InterPro; IPR006195; aa-tRNA-synth_II.
DR InterPro; IPR045864; aa-tRNA-synth_II/BPL/LPL.
DR InterPro; IPR002317; Ser-tRNA-ligase_type_1.
DR InterPro; IPR015866; Ser-tRNA-synth_1_N.
DR InterPro; IPR042103; SerRS_1_N_sf.
DR InterPro; IPR033729; SerRS_core.
DR InterPro; IPR010978; tRNA-bd_arm.
DR NCBIfam; TIGR00414; serS; 1.
DR PANTHER; PTHR11778:SF7; SERINE--TRNA LIGASE, CYTOPLASMIC-RELATED; 1.
DR PANTHER; PTHR11778; SERYL-TRNA SYNTHETASE; 1.
DR Pfam; PF02403; Seryl_tRNA_N; 1.
DR Pfam; PF00587; tRNA-synt_2b; 1.
DR PIRSF; PIRSF001529; Ser-tRNA-synth_IIa; 1.
DR PRINTS; PR00981; TRNASYNTHSER.
DR SUPFAM; SSF55681; Class II aaRS and biotin synthetases; 1.
DR SUPFAM; SSF46589; tRNA-binding arm; 1.
DR PROSITE; PS50862; AA_TRNA_LIGASE_II; 1.
PE 4: Predicted;
KW Aminoacyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00023146};
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Ligase {ECO:0000256|ARBA:ARBA00022598}; Membrane {ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 174..193
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 191..422
FT /note="Aminoacyl-transfer RNA synthetases class-II family
FT profile"
FT /evidence="ECO:0000259|PROSITE:PS50862"
FT REGION 436..456
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 49..100
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 456 AA; 51421 MW; EFA8FF08A4B2E159 CRC64;
MLDINLFRKE KGGDPDLVRN SQRSRFASVE LVDEVIVLDE EWRQRQFELD KIRQELNKTS
KEIGKLKAKR LDATVLIQST EEIKSRLAAK ETEVQDAKST LDAKLVTIGN LVHESVPVSN
DEANNAIVRT WGERRLEGNL KNHVDLCIML DIVALEKGAD VAGGRGYFLK GNGVLLNMAL
INFGLAFLGI RGYTQMQTPF FMRKETMARC AQLAQFDEEL YKVTGDGEEK YLIATSEQPL
CAYHLGDRIY PADLPIRYAG YSTCFRKEAG SHGRDTAGIF RVHQFEKIEQ FCVTSPNDNN
SWELHEEMIK NSEDFYKEIG LPYQLVSIVS GALNDAAAKK YDLEAWFPAS KTYRELVSCS
NCTDYQARRL GIGFGQKKND EQSKQFVHML NSTLTATERT LCCILENFQK EDGVEVPKAL
RPFMGGIDFL PFKKPLDSKQ AADSKPNKSK PKGNAA
//
