ID I1HD01_BRADI Unreviewed; 324 AA.
AC I1HD01;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=Small ribosomal subunit protein uS5c {ECO:0000256|ARBA:ARBA00035156};
GN Name=100841719 {ECO:0000313|EnsemblPlants:KQK03180};
GN ORFNames=BRADI_2g06080v3 {ECO:0000313|EMBL:KQK03180.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQK03180.1};
RN [1] {ECO:0000313|EMBL:KQK03180.1, ECO:0000313|EnsemblPlants:KQK03180}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK03180.1,
RC ECO:0000313|EnsemblPlants:KQK03180};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK03180.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK03180.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK03180}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK03180};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS5 family.
CC {ECO:0000256|ARBA:ARBA00008945, ECO:0000256|RuleBase:RU003823}.
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DR EMBL; CM000881; KQK03180.1; -; Genomic_DNA.
DR RefSeq; XP_003565012.1; XM_003564964.2.
DR AlphaFoldDB; I1HD01; -.
DR STRING; 15368.I1HD01; -.
DR EnsemblPlants; KQK03180; KQK03180; BRADI_2g06080v3.
DR GeneID; 100841719; -.
DR Gramene; KQK03180; KQK03180; BRADI_2g06080v3.
DR KEGG; bdi:100841719; -.
DR eggNOG; KOG0877; Eukaryota.
DR HOGENOM; CLU_075168_0_0_1; -.
DR InParanoid; I1HD01; -.
DR OMA; GNDIHVM; -.
DR OrthoDB; 1219532at2759; -.
DR Proteomes; UP000008810; Chromosome 2.
DR GO; GO:0005763; C:mitochondrial small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR HAMAP; MF_01307_B; Ribosomal_S5_B; 1.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR000851; Ribosomal_uS5.
DR InterPro; IPR005712; Ribosomal_uS5_bac-type.
DR InterPro; IPR005324; Ribosomal_uS5_C.
DR InterPro; IPR013810; Ribosomal_uS5_N.
DR InterPro; IPR018192; Ribosomal_uS5_N_CS.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR NCBIfam; TIGR01021; rpsE_bact; 1.
DR PANTHER; PTHR48277; MITOCHONDRIAL RIBOSOMAL PROTEIN S5; 1.
DR PANTHER; PTHR48277:SF1; MITOCHONDRIAL RIBOSOMAL PROTEIN S5; 1.
DR Pfam; PF00333; Ribosomal_S5; 1.
DR Pfam; PF03719; Ribosomal_S5_C; 1.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR PROSITE; PS00585; RIBOSOMAL_S5; 1.
DR PROSITE; PS50881; S5_DSRBD; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|PROSITE-
KW ProRule:PRU00268};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|PROSITE-
KW ProRule:PRU00268}; RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730}.
FT DOMAIN 168..231
FT /note="S5 DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50881"
FT REGION 52..100
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 63..85
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 324 AA; 34485 MW; 79995D356974B296 CRC64;
MAATATATAM ATATAPPAAP VVTALFSSLP QRLRFCPKPL LSTSRRLVLP VPKSSSWDGA
ASDQEDVESE AEAVSGEDAE EDEDGDKKPL AEPVSSSEFQ FAAPPEGYVE PAPFDELPPE
SPDDVTAAYE ALYGPAFSGV SLMGNNVFEV KVVDPVDVDR DQRPNDDFTE RVVQVNRVTK
VVKGGRQLSY RAIVVVGDMK GHVGVGVGKA KEVTEAITKA GMNGRRNLVT VPLTKYNTFP
HRASADYGAA KVMLRPACPG SGVTAGGAVR IVLEMAGVEN ALGKQLRSKN PLNNARATVK
ATQMMRQFSD VAAERGLPME ELWK
//
