ID I1HTC7_BRADI Unreviewed; 543 AA.
AC I1HTC7;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE RecName: Full=Transcription initiation factor TFIID subunit 12 domain-containing protein {ECO:0000259|Pfam:PF03847};
GN Name=100821588 {ECO:0000313|EnsemblPlants:KQK10558};
GN ORFNames=BRADI_2g54860v3 {ECO:0000313|EMBL:KQK10557.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQK10558};
RN [1] {ECO:0000313|EMBL:KQK10557.1, ECO:0000313|EnsemblPlants:KQK10558}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK10557.1,
RC ECO:0000313|EnsemblPlants:KQK10558};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK10557.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK10557.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK10558}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK10558};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF12 family.
CC {ECO:0000256|ARBA:ARBA00007530}.
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DR EMBL; CM000881; KQK10557.1; -; Genomic_DNA.
DR EMBL; CM000881; KQK10558.1; -; Genomic_DNA.
DR EMBL; CM000881; KQK10561.1; -; Genomic_DNA.
DR EMBL; CM000881; KQK10562.1; -; Genomic_DNA.
DR RefSeq; XP_003564602.1; XM_003564554.3.
DR AlphaFoldDB; I1HTC7; -.
DR STRING; 15368.I1HTC7; -.
DR EnsemblPlants; KQK10557; KQK10557; BRADI_2g54860v3.
DR EnsemblPlants; KQK10558; KQK10558; BRADI_2g54860v3.
DR EnsemblPlants; KQK10561; KQK10561; BRADI_2g54860v3.
DR EnsemblPlants; KQK10562; KQK10562; BRADI_2g54860v3.
DR GeneID; 100821588; -.
DR Gramene; KQK10557; KQK10557; BRADI_2g54860v3.
DR Gramene; KQK10558; KQK10558; BRADI_2g54860v3.
DR Gramene; KQK10561; KQK10561; BRADI_2g54860v3.
DR Gramene; KQK10562; KQK10562; BRADI_2g54860v3.
DR KEGG; bdi:100821588; -.
DR eggNOG; KOG1142; Eukaryota.
DR HOGENOM; CLU_033120_2_0_1; -.
DR InParanoid; I1HTC7; -.
DR OMA; GSQKSMN; -.
DR OrthoDB; 22237at2759; -.
DR Proteomes; UP000008810; Chromosome 2.
DR ExpressionAtlas; I1HTC7; baseline.
DR GO; GO:0000124; C:SAGA complex; IEA:InterPro.
DR GO; GO:0046695; C:SLIK (SAGA-like) complex; IEA:InterPro.
DR GO; GO:0005669; C:transcription factor TFIID complex; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0017025; F:TBP-class protein binding; IBA:GO_Central.
DR GO; GO:0051123; P:RNA polymerase II preinitiation complex assembly; IBA:GO_Central.
DR CDD; cd07981; TAF12; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR037794; TAF12.
DR InterPro; IPR003228; TFIID_TAF12_dom.
DR PANTHER; PTHR12264; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12; 1.
DR PANTHER; PTHR12264:SF26; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B; 1.
DR Pfam; PF03847; TFIID_20kDa; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 404..471
FT /note="Transcription initiation factor TFIID subunit 12"
FT /evidence="ECO:0000259|Pfam:PF03847"
FT REGION 1..105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 228..248
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 263..301
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 357..397
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 514..543
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..31
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 40..55
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 543 AA; 57309 MW; 036E4D8424899322 CRC64;
MAEPSSISAI ASPQPDQLGA SPSAPQSSNP NPLLSPQIPP SPTVSDLSAI SSPQLDPAAA
TAGGGSTEFP PRPPQLQAPS PTQALAGAGG FGQIHRSGSA SRLPAASQLP QYSAATARMY
GGQMSFSGGV GQLGQQQLAA RAAMLGQGQL GMLQGQSNTG TAAHYGLQSQ MMSQPRQKGI
VQGAQFNTAN PAQALQGMQS MGVMGTLGMN QMRPNGTIPY GAQQRFAHAQ MRPQQAQQGA
LSPQKVAGQG LSRTASIAAL NSQLPGSSQN GQILQMSPQQ QQQQQWLKQI QSSMASPVSQ
HQLQQQQRML LMQQLQKTGL SPHQIAQAQQ QHPHLNTQQL IQQQHILQQL QQQQQQLQSP
RLSAPVSQKS ANLTGSQPGT PLSSGTMAGG SASQGAEGTN QLLGKRKIQD LVAQVDPLCK
LDPEVEDLFL EIADDFIESV TAFACSLAKH RKSSVLEAKD VLLHLQKNWH LTVPGFSRDK
NLPRNYVKTG VDPQQPECEA AAVRSAGNKM VANSSVGNHQ TRGPAVEPSP TPTVGALSKI
PRF
//
