ID I1I6S4_BRADI Unreviewed; 286 AA.
AC I1I6S4;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 56.
DE RecName: Full=RNA exonuclease 4 {ECO:0000256|ARBA:ARBA00016937};
GN Name=100827294 {ECO:0000313|EnsemblPlants:KQJ98141};
GN ORFNames=BRADI_3g35110v3 {ECO:0000313|EMBL:KQJ98141.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQJ98141.1};
RN [1] {ECO:0000313|EMBL:KQJ98141.1, ECO:0000313|EnsemblPlants:KQJ98141}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ98141.1,
RC ECO:0000313|EnsemblPlants:KQJ98141};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQJ98141.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ98141.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQJ98141}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ98141};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the REXO1/REXO3 family.
CC {ECO:0000256|ARBA:ARBA00006357}.
CC -!- SIMILARITY: Belongs to the REXO4 family.
CC {ECO:0000256|ARBA:ARBA00010489}.
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DR EMBL; CM000882; KQJ98141.1; -; Genomic_DNA.
DR RefSeq; XP_003574435.1; XM_003574387.3.
DR AlphaFoldDB; I1I6S4; -.
DR STRING; 15368.I1I6S4; -.
DR EnsemblPlants; KQJ98141; KQJ98141; BRADI_3g35110v3.
DR GeneID; 100827294; -.
DR Gramene; KQJ98141; KQJ98141; BRADI_3g35110v3.
DR KEGG; bdi:100827294; -.
DR eggNOG; KOG2249; Eukaryota.
DR HOGENOM; CLU_022453_2_2_1; -.
DR InParanoid; I1I6S4; -.
DR OMA; AKDFWVV; -.
DR OrthoDB; 5479236at2759; -.
DR Proteomes; UP000008810; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IBA:GO_Central.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR CDD; cd06144; REX4_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR037431; REX4_DEDDh_dom.
DR InterPro; IPR047021; REXO1/3/4-like.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR12801:SF45; RNA EXONUCLEASE 4; 1.
DR PANTHER; PTHR12801; RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT DOMAIN 93..252
FT /note="Exonuclease"
FT /evidence="ECO:0000259|SMART:SM00479"
FT REGION 1..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 264..286
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 36..50
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 286 AA; 31933 MW; 2EDCEC97170FF053 CRC64;
MEAPPPSSGA PATAANTNRT RKRKPKPKPK AAGPSTLNPN WAQLQSKLPA STFLGKRKHR
HGPPPPPEPA PTPEAVELGV KLEPTSDDTS LTKALAIDCE MVGVGATGSK SALGRVTLVN
SFGNVVYDEY VRPMERIVDY RTHISGIRPK HMNKAKDFWI VQKDVAELIT GKILVGHALH
HDLKVLLLGH PKKDIRDTSE YEVFRREGKR RSLKDLAAQE LCVKIQQQEH CPIEDARAAM
FIYKKHKKGW EKNRKEQFKF KNKIKKRGNK KSAEANEDSN VPTVLL
//
