ID I1ICL0_BRADI Unreviewed; 432 AA.
AC I1ICL0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN Name=100845392 {ECO:0000313|EnsemblPlants:KQK00762};
GN ORFNames=BRADI_3g51650v3 {ECO:0000313|EMBL:KQK00762.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQK00762.1};
RN [1] {ECO:0000313|EMBL:KQK00762.1, ECO:0000313|EnsemblPlants:KQK00762}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK00762.1,
RC ECO:0000313|EnsemblPlants:KQK00762};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQK00762.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQK00762.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQK00762}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQK00762};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000882; KQK00762.1; -; Genomic_DNA.
DR RefSeq; XP_003570098.1; XM_003570050.3.
DR AlphaFoldDB; I1ICL0; -.
DR STRING; 15368.I1ICL0; -.
DR EnsemblPlants; KQK00762; KQK00762; BRADI_3g51650v3.
DR GeneID; 100845392; -.
DR Gramene; KQK00762; KQK00762; BRADI_3g51650v3.
DR KEGG; bdi:100845392; -.
DR eggNOG; KOG0274; Eukaryota.
DR HOGENOM; CLU_037680_0_0_1; -.
DR InParanoid; I1ICL0; -.
DR OMA; LATYQCV; -.
DR OrthoDB; 363481at2759; -.
DR Proteomes; UP000008810; Chromosome 3.
DR ExpressionAtlas; I1ICL0; baseline.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.1190; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR44489; -; 1.
DR PANTHER; PTHR44489:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 63; 1.
DR Pfam; PF00400; WD40; 3.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 28..54
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 106..133
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT REPEAT 144..185
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 267..306
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT ZN_FING 28..54
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 106..133
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 56..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 432 AA; 46429 MW; 6986FE2FDEA104AE CRC64;
MDLEADGRFG NKRVHNRLGP APGAASSSSS GKVCVHWRAG RCNRFPCPFL HSELPEATSK
RPSQRDGPGG HVWRNPNSGG GGGRGGGGFN KWGRGPGGAD GGVRHKVPDR PCKYFLAGDC
TYGEKCRFPH TYCMSNSITL LTPLQGHEKV VTGIALPTGS DKLYSGSKDG TVRLWDCQTG
QCASVINIGA EIGCMIIEGP WLFVGLPDAV KVWNMQTQAE MNLTGPTGQV YALAVGNELL
FAATQDGRIL AWRFSAATNC FEPAASLVGH QLAVVSLVVG AMRLYSGSMD KTIRVWDLAT
LQCIQTLSDH TSVVMSVLCW DQFLLSCSLD QTIKVWAATE SGNLEVTYTH KEENGALALT
GMPDAQSKPV LVCSLNDNTV RLYDLPSFGD RGRIFSKQEI RAIQTGPGGL FFTGDGAGEL
KVWQWVIDAS QT
//
