ID I1IH98_BRADI Unreviewed; 733 AA.
AC I1IH98;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE RecName: Full=Suppressor of forked domain-containing protein {ECO:0000259|Pfam:PF05843};
GN Name=100838953 {ECO:0000313|EnsemblPlants:KQJ86206};
GN ORFNames=BRADI_4g03980v3 {ECO:0000313|EMBL:KQJ86206.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQJ86206};
RN [1] {ECO:0000313|EMBL:KQJ86206.1, ECO:0000313|EnsemblPlants:KQJ86206}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ86206.1,
RC ECO:0000313|EnsemblPlants:KQJ86206};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQJ86206.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ86206.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQJ86206}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ86206};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM000883; KQJ86206.1; -; Genomic_DNA.
DR RefSeq; XP_010237133.1; XM_010238831.2.
DR AlphaFoldDB; I1IH98; -.
DR EnsemblPlants; KQJ86206; KQJ86206; BRADI_4g03980v3.
DR GeneID; 100838953; -.
DR Gramene; KQJ86206; KQJ86206; BRADI_4g03980v3.
DR eggNOG; KOG1914; Eukaryota.
DR HOGENOM; CLU_007630_3_0_1; -.
DR OMA; CFRGPFV; -.
DR OrthoDB; 23291at2759; -.
DR Proteomes; UP000008810; Chromosome 4.
DR ExpressionAtlas; I1IH98; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0031124; P:mRNA 3'-end processing; IEA:InterPro.
DR Gene3D; 1.25.40.1040; -; 1.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR045243; Rna14-like.
DR InterPro; IPR008847; Suf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR19980:SF0; CLEAVAGE STIMULATION FACTOR SUBUNIT 3; 1.
DR PANTHER; PTHR19980; RNA CLEAVAGE STIMULATION FACTOR; 1.
DR Pfam; PF05843; Suf; 1.
DR SMART; SM00386; HAT; 10.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 265..298
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 334..626
FT /note="Suppressor of forked"
FT /evidence="ECO:0000259|Pfam:PF05843"
FT REGION 628..733
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 637..654
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 663..682
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 712..733
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 733 AA; 82580 MW; EB530DC3A22E53E1 CRC64;
MDIYNVEAAE ILAKEALVLP ITEATPIYEK LLATFPTAAK YWKQYVEAYI SAHNEDIAKQ
IFSRCLLTCP HINLWRCYIT FIKRVNNKRG SEGLEETKKA FDFMLNYVGN DVASGPVWMD
YIAFLKSMPV VTPQDESHRM TTIRKVYQKA ILVPTSHVEQ LWKDYDNFEN SVSRTLAKGL
LSEYQPKFNS AKAVYRERKK YIEDIDWNML ATPPTGSYEE EQQCMAWKRL LAFEKGNPQR
IDAATANRRI SFTYEQCLMY LYHHPDVWYD FAMWHAKNGS TDSAIQIFQR AVKALPGSEV
LKYAFAELEE SVGAIQPAKT IYESLIAENA NMTSLAHIQF IRFLRRTEGI EAARKFFLDA
RKLPGCTYHV YVAYATMSFC LDKDAKVAQN VFEAGLKRFM QEPGYVLEYA DFLCRLNDDR
NVRALFERAL SLLSPEKSIE VWKRFVQFEQ IYGDLASMQK VEQRRKEALS RTSEDGSSSL
EDTLYDVVSR YNYMDLWPCS SKELDYLSRQ EWLAKNMFKK AGKSVILTSG ATFDKANIGV
GASAKTLPQP AKVVRPEISR MVVYDPRQMK GPVISTTSSG YTKEVDEIFK MLSPPIMSFI
TNLPAIEGPS PDIDIVLSVL LQSTLPTGHD VGKPSGPVTG SATNDLSGPG KSGFNQNGHR
PPRDGQPLKR KAIGRQEEED AAAAAQNRAM PRDIFRLRQI HRSRGAGGPA QSGSAAMSSG
SAFSGEQSAN SSS
//
