ID I1IVN4_BRADI Unreviewed; 1026 AA.
AC I1IVN4;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=Protein transport protein Sec24-like {ECO:0008006|Google:ProtNLM};
GN Name=100839661 {ECO:0000313|EnsemblPlants:KQJ81529};
GN ORFNames=BRADI_5g01280v3 {ECO:0000313|EMBL:PNT60537.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:PNT60537.1};
RN [1] {ECO:0000313|EMBL:PNT60537.1, ECO:0000313|EnsemblPlants:KQJ81529}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:PNT60537.1,
RC ECO:0000313|EnsemblPlants:KQJ81529};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:PNT60537.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:PNT60537.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQJ81529}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ81529};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
CC {ECO:0000256|ARBA:ARBA00008334}.
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DR EMBL; CM000884; KQJ81529.1; -; Genomic_DNA.
DR EMBL; CM000884; PNT60537.1; -; Genomic_DNA.
DR RefSeq; XP_010239628.1; XM_010241326.2.
DR AlphaFoldDB; I1IVN4; -.
DR STRING; 15368.I1IVN4; -.
DR EnsemblPlants; KQJ81529; KQJ81529; BRADI_5g01280v3.
DR EnsemblPlants; PNT60537; PNT60537; BRADI_5g01280v3.
DR GeneID; 100839661; -.
DR Gramene; KQJ81529; KQJ81529; BRADI_5g01280v3.
DR Gramene; PNT60537; PNT60537; BRADI_5g01280v3.
DR KEGG; bdi:100839661; -.
DR eggNOG; KOG1985; Eukaryota.
DR HOGENOM; CLU_004589_4_1_1; -.
DR InParanoid; I1IVN4; -.
DR OMA; AVECSKQ; -.
DR OrthoDB; 977017at2759; -.
DR Proteomes; UP000008810; Chromosome 5.
DR GO; GO:0030127; C:COPII vesicle coat; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; IEA:EnsemblPlants.
DR GO; GO:0070971; C:endoplasmic reticulum exit site; IBA:GO_Central.
DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW.
DR GO; GO:0000149; F:SNARE binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IBA:GO_Central.
DR GO; GO:0090110; P:COPII-coated vesicle cargo loading; IBA:GO_Central.
DR GO; GO:0007029; P:endoplasmic reticulum organization; IEA:EnsemblPlants.
DR GO; GO:0080119; P:ER body organization; IEA:EnsemblPlants.
DR GO; GO:0007030; P:Golgi organization; IEA:EnsemblPlants.
DR GO; GO:0006886; P:intracellular protein transport; IEA:EnsemblPlants.
DR GO; GO:0048232; P:male gamete generation; IEA:EnsemblPlants.
DR GO; GO:0032876; P:negative regulation of DNA endoreduplication; IEA:EnsemblPlants.
DR GO; GO:0009555; P:pollen development; IEA:EnsemblPlants.
DR GO; GO:0008361; P:regulation of cell size; IEA:EnsemblPlants.
DR GO; GO:0090392; P:sepal giant cell differentiation; IEA:EnsemblPlants.
DR GO; GO:0046740; P:transport of virus in host, cell to cell; IEA:EnsemblPlants.
DR CDD; cd01479; Sec24-like; 1.
DR Gene3D; 2.60.40.1670; beta-sandwich domain of Sec23/24; 1.
DR Gene3D; 1.20.120.730; Sec23/Sec24 helical domain; 1.
DR Gene3D; 3.40.20.10; Severin; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR Gene3D; 2.30.30.380; Zn-finger domain of Sec23/24; 1.
DR InterPro; IPR029006; ADF-H/Gelsolin-like_dom_sf.
DR InterPro; IPR036180; Gelsolin-like_dom_sf.
DR InterPro; IPR006900; Sec23/24_helical_dom.
DR InterPro; IPR036175; Sec23/24_helical_dom_sf.
DR InterPro; IPR006896; Sec23/24_trunk_dom.
DR InterPro; IPR012990; Sec23_24_beta_S.
DR InterPro; IPR041742; Sec24-like_trunk_dom.
DR InterPro; IPR036465; vWFA_dom_sf.
DR InterPro; IPR006895; Znf_Sec23_Sec24.
DR InterPro; IPR036174; Znf_Sec23_Sec24_sf.
DR PANTHER; PTHR13803; SEC24-RELATED PROTEIN; 1.
DR PANTHER; PTHR13803:SF39; SECRETORY 24AB, ISOFORM A; 1.
DR Pfam; PF08033; Sec23_BS; 1.
DR Pfam; PF04815; Sec23_helical; 1.
DR Pfam; PF04811; Sec23_trunk; 1.
DR Pfam; PF04810; zf-Sec23_Sec24; 1.
DR SUPFAM; SSF81995; beta-sandwich domain of Sec23/24; 1.
DR SUPFAM; SSF82754; C-terminal, gelsolin-like domain of Sec23/24; 1.
DR SUPFAM; SSF81811; Helical domain of Sec23/24; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
DR SUPFAM; SSF82919; Zn-finger domain of Sec23/24; 1.
PE 3: Inferred from homology;
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 358..395
FT /note="Zinc finger Sec23/Sec24-type"
FT /evidence="ECO:0000259|Pfam:PF04810"
FT DOMAIN 432..668
FT /note="Sec23/Sec24 trunk"
FT /evidence="ECO:0000259|Pfam:PF04811"
FT DOMAIN 674..758
FT /note="Sec23/Sec24 beta-sandwich"
FT /evidence="ECO:0000259|Pfam:PF08033"
FT DOMAIN 769..872
FT /note="Sec23/Sec24 helical"
FT /evidence="ECO:0000259|Pfam:PF04815"
FT REGION 1..245
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 42..63
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 77..172
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 185..206
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 218..240
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1026 AA; 111691 MW; 27AB02D3DCD9D69C CRC64;
MHPPTGNERL PGRPVSGFVP GSAAAAGPPP FAAGAPLMRP GAAAPFAPPT QQPGVPPPLA
GASPAAPFGA APPAAMGGYR GPPPPQGPFG TGPPPQGPFA TASPPQGPFA TASPPQGPFA
KAPPPQGPFA AAPPSQGPFA AGPPSQGPFA AGPPSQGPFA TAPPPFRHPP SLGQPQSPTG
SGMPAPTYVR PPPVQSQPPP VQGYYPGVPS SNPQFPMSRP AYQPPMQTMP PPPMGPPSSY
SNQPAYPTSG PPMGTLQSLV EDFQSLSVSS APGSLDPGVD VKGLPRPLDG DEEPAKVFEA
YPLNCHPRYF RLTTHTIPAS QSLVSRWHLP LGAVVHPLAE SPDGEEVPVV NFGSAGVIRC
RRCRTYINPY ATFADAGRKW RCNLCTLLND VPGEYFCALD ASGRRYDTDQ RPELSKGTVE
FVAPTEYMVR PPMPPSYFFL IDVSVSAVRS GLLEVVAKTI KSCLDDLLGF PRTQIGFLTF
DSTLHFHNFK SSLSQPQMMV VADLDDVFLP LPDDLLVNLV DSRHVVESFL DSLPNMFHDN
VNVESALGPA LKAAFMVMGQ IGGKLLVFQS TLPSLGIGRL RLRGDDVRAY GTDKEHILRV
PEDPFYKQMA AEFTKNQIAV DIFSFSDKYC DIASLGSLAK YTGGQVYHYP SFQATTHGEK
LKHELSRDLT RETAWESVMR IRCGKGVRFT TYHGHFMLRS TDLLALPAVD SDKAFAMQLS
LEETLMTTQA VYFQVALLYT SSSGERRIRV HTAAAPVVTD LSEMYRQADT GAIVSLLARI
AVENSLSDKL DSVRQQLQLK LVRSLKEYRN LYVVQHRIGG RLIYPESLRY LPLYILAICK
SLALRGGYAD VSLDERCAAG FSMMILPARR LLNFIYPSLY RLDEVLTMEP GRIDGSLKRL
PLTLQCLDTA GLYLLDDGFT FLVWLGRMLP PELVNDILGV SLANFPDLSK IQLRECNNYH
SRNFMTVLRT LREKDFSCYQ LPRVVRQGEQ PREGFLLLSN LVEDQMAGTS SYMDWILQIH
RQTQSS
//
