ID I1IVY1_BRADI Unreviewed; 488 AA.
AC I1IVY1;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=RING-CH-type domain-containing protein {ECO:0000259|PROSITE:PS51292};
GN Name=100836924 {ECO:0000313|EnsemblPlants:KQJ81686};
GN ORFNames=BRADI_5g02290v3 {ECO:0000313|EMBL:KQJ81686.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EnsemblPlants:KQJ81686};
RN [1] {ECO:0000313|EMBL:KQJ81686.1, ECO:0000313|EnsemblPlants:KQJ81686}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ81686.1,
RC ECO:0000313|EnsemblPlants:KQJ81686};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQJ81686.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ81686.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQJ81686}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ81686};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
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DR EMBL; CM000884; KQJ81686.1; -; Genomic_DNA.
DR RefSeq; XP_003580994.1; XM_003580946.3.
DR AlphaFoldDB; I1IVY1; -.
DR STRING; 15368.I1IVY1; -.
DR EnsemblPlants; KQJ81686; KQJ81686; BRADI_5g02290v3.
DR GeneID; 100836924; -.
DR Gramene; KQJ81686; KQJ81686; BRADI_5g02290v3.
DR KEGG; bdi:100836924; -.
DR eggNOG; KOG1609; Eukaryota.
DR HOGENOM; CLU_039981_1_0_1; -.
DR InParanoid; I1IVY1; -.
DR OMA; NTETCDA; -.
DR OrthoDB; 663778at2759; -.
DR Proteomes; UP000008810; Chromosome 5.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd16495; RING_CH-C4HC3_MARCH; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46158; OS02G0165000 PROTEIN; 1.
DR PANTHER; PTHR46158:SF1; RING_U-BOX SUPERFAMILY PROTEIN; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 321..340
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 346..364
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 376..395
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 401..424
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 223..285
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
FT REGION 1..85
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 142..161
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 196..220
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 444..488
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..24
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 38..52
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 448..488
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 488 AA; 52955 MW; E677DFB8C6F48B08 CRC64;
MDFPRMEKQD SSSTTTTTDP MQDPASLVQP KRPHLSIDIP TGSTTAQHHH HNHPLTPTPI
DTDAPGSCSS SNVPPKAVAA PLPQRSSSFM LRQTVKSLLP GGGSFKSSVR GYEASFSKLF
GSRITRTSSL PVVDDDHALS VHRAEKTPSV PDTDKSGHMY RSQSLPMNMK KFNSAKSIKR
MNSLGGVYRV VPSTPRAAPA TASNAVPDIA PAEPGDGEED GEDIAEEEAV CRICMVELSE
GSGTMKLECS CKGELALAHK DCALKWFSMK GTRTCEVCKE EVQNLPVTLL RVQSVQGDPR
RVGNGGANGP RYVRHRLWHG TPILVIISIL AYFCFLEQLL VSHNGLAALA ISLPFSCILG
LFSSLTTTSM VARKYVWIYA AAQFLFVVFF THLFYRYLHL QAVISIILAT FAGFGVGMIG
NSIIVEILRW RAMPPIQVRR ARRPRVGVAQ QQHQQAPASG QPSGQSSASV EGQHNAGSDI
ENPTVSRA
//
