ID   I1IWJ9_BRADI            Unreviewed;      1442 AA.
AC   I1IWJ9;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 58.
DE   RecName: Full=Cleavage/polyadenylation specificity factor A subunit C-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=100831691 {ECO:0000313|EnsemblPlants:KQJ81989};
GN   ORFNames=BRADI_5g04673v3 {ECO:0000313|EMBL:KQJ81989.1};
OS   Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX   NCBI_TaxID=15368 {ECO:0000313|EMBL:KQJ81989.1};
RN   [1] {ECO:0000313|EMBL:KQJ81989.1, ECO:0000313|EnsemblPlants:KQJ81989}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Bd21 {ECO:0000313|EMBL:KQJ81989.1,
RC   ECO:0000313|EnsemblPlants:KQJ81989};
RX   PubMed=20148030; DOI=10.1038/nature08747;
RG   International Brachypodium Initiative;
RT   "Genome sequencing and analysis of the model grass Brachypodium
RT   distachyon.";
RL   Nature 463:763-768(2010).
RN   [2] {ECO:0000313|EMBL:KQJ81989.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Bd21 {ECO:0000313|EMBL:KQJ81989.1};
RG   The International Brachypodium Initiative;
RA   Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA   Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA   Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT   "WGS assembly of Brachypodium distachyon.";
RL   Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:KQJ81989}
RP   IDENTIFICATION.
RC   STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ81989};
RG   EnsemblPlants;
RL   Submitted (AUG-2018) to UniProtKB.
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DR   EMBL; CM000884; KQJ81989.1; -; Genomic_DNA.
DR   RefSeq; XP_003579318.1; XM_003579270.3.
DR   STRING; 15368.I1IWJ9; -.
DR   EnsemblPlants; KQJ81989; KQJ81989; BRADI_5g04673v3.
DR   GeneID; 100831691; -.
DR   Gramene; KQJ81989; KQJ81989; BRADI_5g04673v3.
DR   KEGG; bdi:100831691; -.
DR   eggNOG; KOG1896; Eukaryota.
DR   HOGENOM; CLU_002414_0_0_1; -.
DR   InParanoid; I1IWJ9; -.
DR   OMA; PMTKFKL; -.
DR   OrthoDB; 149432at2759; -.
DR   Proteomes; UP000008810; Chromosome 5.
DR   ExpressionAtlas; I1IWJ9; baseline.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006378; P:mRNA polyadenylation; IBA:GO_Central.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   PANTHER; PTHR10644:SF2; CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1; 1.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT   DOMAIN          184..698
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          1095..1406
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
SQ   SEQUENCE   1442 AA;  157845 MW;  00FDB3978D47A055 CRC64;
     MSYAAYKMMH WPTGIDHCAA GFITHCPSDA AAFCSAAAAS GPEGDVGLVA AARHPKRLGP
     TPNLVVAAAN VLEVYAVRAD AAAADGAGGA QPSSSSGAVF DGISGARLEL VCHYRLHGNI
     ESMAILSDGA ENRRDSIALA FRDAKITCLE FDDAIHGLRT SSMHCFEGPE WQHLKRGRES
     FAWGPVIKSD PLGRCGAALV YGLQMIILKS AQVGQSLVGE DEPTRALSSA AVRIESSYLI
     DLRALDTNHV KDFTFVHGYI EPVLVILHER EPTWAGRISS KHHTCMISAF SISMTLKQHP
     MIWSAANIPH DAYQILSVPP PISGVLVICA NSIHYHSQST SCSLALNNFA SQPDGSPEIH
     KVNFHVELDA AKATWLSNDI VMFSAKTGEM LLLTVVYDGR TVQKLDLMKS KASVISSGVT
     TIGSSFFFLG SRVGDSLLVQ FSCGVPTSVI PDIADERSAD IEGDLPFSKR LKRVPSDILQ
     DVTSVEELSF QNNMLPNSLE SAQKISYVVR DALVNVGPLK DFSYGLRVNA DPNATGNAKQ
     SNYELVCCSG HGKNGALSVL QQSIRPDLIT EVELPSCRGI WTVYYKSSRG HTTEDNEYHA
     YLIISLESRT MVLETGDDLG EVTETVDYYV QGATITAGNL FGRRRVIQVY ATGARVLDGS
     FMTQELNFTA LSSESSSSGS EPLGVASASI ADPYVLLKMV DGTIQLLVGD HSTCALSINA
     PSTLTSRGER ISACTLYHDR GPEPWLRKTR GDAWLSSGVT VAVDVSGSSS QDQSDIYCII
     CYESGKLEIF EVPSFRQVFS VGSFFSGESL LVDAFAQGFT EDSAEGRQDE TKVSLKKEVA
     NNIRIVELAM HRWSGQFSRP FLFGLLNDGT LLCYQAYCYE GLESNIKGTS LSPDGSVDLG
     NASDSRLKNL RFHRVSVDIT SREDISSLAR PRITIFNNVG GYEGLFLSGT RPVWVMVCRQ
     RFRVHPQLCD GPIEAFTVLH NVNCSHGLIY VTSQGFLKIC QLPSAYNYDN YWPVQKIPLH
     GTPHQVTYYA EQSLYPLIVS VPVVRPLNQV LSIMADQEMI HHMDNDASSA DDLQKTYTVE
     EFEVRVLELE KPGGRWETRS TIPMQSFENA LTVRIVTLHN TTTKENETLM AIGTAYVQGE
     DVAARGRVLL FSFTKSENSQ NLVTEVYSKE SKGAVSAVAS LQGHLVIASG PKITLNKWNG
     SELTAVAFYD APLHVVSLNI VKNFVLFGDI HKSVYFLSWK EQGSQLTLLA KDFGSLDCFA
     TEFLIDGSTL SLVVSDSDKN LQIFYYAPKM VESWKGQKLL SRAELHVGAH MTKFLRLQML
     PAQGLASEKT NRFALLFGTL DGSIGCIAPV DELTFRRLQS LQRKLVDAVS HVCGLNPRSF
     RQFKSNGKAH RPGPDNIIDF ELLTYYEILS LEEQLDMAQQ IGTTRAQILS NFSDISLGTS
     FL
//