ID I1IX95_BRADI Unreviewed; 534 AA.
AC I1IX95;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=Poly A polymerase head domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100821667 {ECO:0000313|EnsemblPlants:KQJ82376};
GN ORFNames=BRADI_5g08637v3 {ECO:0000313|EMBL:KQJ82376.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQJ82376.1};
RN [1] {ECO:0000313|EMBL:KQJ82376.1, ECO:0000313|EnsemblPlants:KQJ82376}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ82376.1,
RC ECO:0000313|EnsemblPlants:KQJ82376};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQJ82376.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ82376.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQJ82376}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ82376};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the tRNA nucleotidyltransferase/poly(A)
CC polymerase family. {ECO:0000256|ARBA:ARBA00007265,
CC ECO:0000256|RuleBase:RU003953}.
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DR EMBL; CM000884; KQJ82376.1; -; Genomic_DNA.
DR RefSeq; XP_010239840.1; XM_010241538.2.
DR AlphaFoldDB; I1IX95; -.
DR STRING; 15368.I1IX95; -.
DR EnsemblPlants; KQJ82376; KQJ82376; BRADI_5g08637v3.
DR GeneID; 100821667; -.
DR Gramene; KQJ82376; KQJ82376; BRADI_5g08637v3.
DR KEGG; bdi:100821667; -.
DR eggNOG; KOG2159; Eukaryota.
DR HOGENOM; CLU_015786_0_1_1; -.
DR InParanoid; I1IX95; -.
DR OMA; KLIECVQ; -.
DR OrthoDB; 5404757at2759; -.
DR Proteomes; UP000008810; Chromosome 5.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001680; P:tRNA 3'-terminal CCA addition; IEA:UniProt.
DR CDD; cd05398; NT_ClassII-CCAase; 1.
DR Gene3D; 3.30.460.10; Beta Polymerase, domain 2; 1.
DR Gene3D; 1.10.3090.10; cca-adding enzyme, domain 2; 1.
DR InterPro; IPR043519; NT_sf.
DR InterPro; IPR002646; PolA_pol_head_dom.
DR InterPro; IPR032828; PolyA_RNA-bd.
DR PANTHER; PTHR43051; POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN; 1.
DR PANTHER; PTHR43051:SF2; POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED; 1.
DR Pfam; PF01743; PolyA_pol; 1.
DR Pfam; PF12627; PolyA_pol_RNAbd; 1.
DR SUPFAM; SSF81301; Nucleotidyltransferase; 1.
DR SUPFAM; SSF81891; Poly A polymerase C-terminal region-like; 1.
PE 3: Inferred from homology;
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008810};
KW RNA-binding {ECO:0000256|RuleBase:RU003953};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU003953}.
FT DOMAIN 102..230
FT /note="Poly A polymerase head"
FT /evidence="ECO:0000259|Pfam:PF01743"
FT DOMAIN 257..318
FT /note="tRNA nucleotidyltransferase/poly(A) polymerase RNA
FT and SrmB- binding"
FT /evidence="ECO:0000259|Pfam:PF12627"
FT REGION 15..69
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 534 AA; 59765 MW; DFA0093A8F06A363 CRC64;
MALRSPELRF AATSGLGALS RPSRLTPSPL AALATPRRRR RGPSPSPSPS PSDSNPSTAS
ADDTEGPEWK KVSAKRFGFK ESMIPDEAWN VLHRLRSRGY DVYLVGGCVR DLIMKKIPKD
FDIITTADLR QVKDTFTGSA VIVGRRFPIV HVHDNNSIVE VSSFNTYARG SSGNQAHTSK
SPHCSKNDYI RWKNCQGRDF TINGLMFNPY SEKIYDYLGG IEDIKKAKVR TVIPAGTSFH
EDCARILRAI RIAARLGFSF PKETAYYVRT LACSVARLDK GRLLMEVNYM LAYGSAEASL
RLLWRFGLLE HLLPFQAAYF SSTHFKRKDK GTNMLLILFS KLDSFLAPNR PCHNSLWISI
LAFHEALVRQ PRDPLVVATF ALAMYLGGDL SLAVDIGQSI NRRHDAGFSE LLEPQVWSDK
HLVAEVQGLA TSMRRALTEM TDEYYVANAM AKIPQAPSSD LVFIPLQAYL KVLKLIECVQ
HGKKECGYEP KRDGNIDYHS LSHGTPAEVR NLFTLVIFDT IYPPNLEKED DDSS
//
