ID I1J0H1_BRADI Unreviewed; 441 AA.
AC I1J0H1;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE RecName: Full=Splicing factor Cactin {ECO:0000256|ARBA:ARBA00034534};
GN Name=100827746 {ECO:0000313|EnsemblPlants:KQJ84002};
GN ORFNames=BRADI_5g18070v3 {ECO:0000313|EMBL:KQJ84002.1};
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368 {ECO:0000313|EMBL:KQJ84002.1};
RN [1] {ECO:0000313|EMBL:KQJ84002.1, ECO:0000313|EnsemblPlants:KQJ84002}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ84002.1,
RC ECO:0000313|EnsemblPlants:KQJ84002};
RX PubMed=20148030; DOI=10.1038/nature08747;
RG International Brachypodium Initiative;
RT "Genome sequencing and analysis of the model grass Brachypodium
RT distachyon.";
RL Nature 463:763-768(2010).
RN [2] {ECO:0000313|EMBL:KQJ84002.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bd21 {ECO:0000313|EMBL:KQJ84002.1};
RG The International Brachypodium Initiative;
RA Lucas S., Harmon-Smith M., Lail K., Tice H., Grimwood J., Bruce D.,
RA Barry K., Shu S., Lindquist E., Wang M., Pitluck S., Vogel J.P.,
RA Garvin D.F., Mockler T.C., Schmutz J., Rokhsar D., Bevan M.W.;
RT "WGS assembly of Brachypodium distachyon.";
RL Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:KQJ84002}
RP IDENTIFICATION.
RC STRAIN=cv. Bd21 {ECO:0000313|EnsemblPlants:KQJ84002};
RG EnsemblPlants;
RL Submitted (AUG-2018) to UniProtKB.
CC -!- SIMILARITY: Belongs to the CACTIN family.
CC {ECO:0000256|ARBA:ARBA00006895}.
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DR EMBL; CM000884; KQJ84002.1; -; Genomic_DNA.
DR RefSeq; XP_003581515.1; XM_003581467.2.
DR AlphaFoldDB; I1J0H1; -.
DR STRING; 15368.I1J0H1; -.
DR EnsemblPlants; KQJ84002; KQJ84002; BRADI_5g18070v3.
DR GeneID; 100827746; -.
DR Gramene; KQJ84002; KQJ84002; BRADI_5g18070v3.
DR KEGG; bdi:100827746; -.
DR eggNOG; KOG2370; Eukaryota.
DR HOGENOM; CLU_043730_0_0_1; -.
DR InParanoid; I1J0H1; -.
DR OMA; RCTFDRG; -.
DR OrthoDB; 558574at2759; -.
DR Proteomes; UP000008810; Chromosome 5.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005681; C:spliceosomal complex; IBA:GO_Central.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IBA:GO_Central.
DR InterPro; IPR019134; Cactin_C.
DR InterPro; IPR018816; Cactin_central.
DR PANTHER; PTHR21737:SF18; OS04G0558200 PROTEIN; 1.
DR PANTHER; PTHR21737; POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3; 1.
DR Pfam; PF10312; Cactin_mid; 1.
DR Pfam; PF09732; CactinC_cactus; 1.
DR SMART; SM01050; CactinC_cactus; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008810}.
FT DOMAIN 108..273
FT /note="Splicing factor cactin central"
FT /evidence="ECO:0000259|Pfam:PF10312"
FT DOMAIN 322..441
FT /note="Splicing factor Cactin C-terminal"
FT /evidence="ECO:0000259|Pfam:PF09732"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 277..314
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 290..311
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 441 AA; 49084 MW; 2BF383DA2D2A097A CRC64;
MANPSAASRA EEITRPSKSL SKAAHRRAAA VSQKLAARGL CTFIWHKKLD RDLSRGLVPD
IVSLRSERRR CLARRKEAAA VSSSSAAASR RTSPPPITTA FLARAEEDAK EAAFLLEQSR
LRAETRFGHG RPKPIDLLVK SLDGTLRCAL SAFRGASLED LRELGKQIAE PAGLDRANGP
FWEAAKVMCD AEIAKAAGTA ASPWTAGGSG SLLYPVIVAD VRRDVGCKSA EELDEMQATI
AARLATGQAM VVEYWQEVLE LIRVERARKF LEENYSTRDD APPAFDGHDE EPESADDDGD
GFADADEEES EAICPVAVPR TLTKPKYIAR VRSGFEWNKY NRVHYDHDRP PPKTVKGYKF
VVFYPGFTGT KAPEYTIHKD GDGESGETCI IRFHAGPPYE DIAFRIVNKE WEYSRKAGFR
CTFDRGILHL NFHFKRFFYK R
//
