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Database: UniProt
Entry: I1J5A4_SOYBN
LinkDB: I1J5A4_SOYBN
Original site: I1J5A4_SOYBN 
ID   I1J5A4_SOYBN            Unreviewed;       927 AA.
AC   I1J5A4;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 69.
DE   RecName: Full=PWI domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=100809428 {ECO:0000313|EnsemblPlants:KRH74611};
GN   ORFNames=GLYMA_01G031400 {ECO:0000313|EMBL:KRH74611.1};
OS   Glycine max (Soybean) (Glycine hispida).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC   Glycine subgen. Soja.
OX   NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH74611.1};
RN   [1] {ECO:0000313|EMBL:KRH74611.1, ECO:0000313|EnsemblPlants:KRH74611}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH74611};
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH74611.1};
RX   PubMed=20075913; DOI=10.1038/nature08670;
RA   Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA   Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA   Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA   Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA   Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA   Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA   Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA   Stacey G., Shoemaker R.C., Jackson S.A.;
RT   "Genome sequence of the palaeopolyploid soybean.";
RL   Nature 463:178-183(2010).
RN   [2] {ECO:0000313|EnsemblPlants:KRH74611}
RP   IDENTIFICATION.
RC   STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH74611};
RG   EnsemblPlants;
RL   Submitted (FEB-2018) to UniProtKB.
RN   [3] {ECO:0000313|EMBL:KRH74611.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH74611.1};
RA   Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA   Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA   Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA   Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA   Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA   Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA   Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA   Jackson S.;
RT   "WGS assembly of Glycine max.";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CM000834; KRH74611.1; -; Genomic_DNA.
DR   RefSeq; XP_003517728.1; XM_003517680.3.
DR   AlphaFoldDB; I1J5A4; -.
DR   SMR; I1J5A4; -.
DR   STRING; 3847.I1J5A4; -.
DR   PaxDb; 3847-GLYMA01G03810-1; -.
DR   EnsemblPlants; KRH74611; KRH74611; GLYMA_01G031400.
DR   GeneID; 100809428; -.
DR   Gramene; KRH74611; KRH74611; GLYMA_01G031400.
DR   KEGG; gmx:100809428; -.
DR   eggNOG; KOG2253; Eukaryota.
DR   InParanoid; I1J5A4; -.
DR   OMA; LSNWEIR; -.
DR   OrthoDB; 55687at2759; -.
DR   Proteomes; UP000008827; Chromosome 1.
DR   ExpressionAtlas; I1J5A4; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProt.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR   CDD; cd12446; RRM_RBM25; 1.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 1.20.1390.10; PWI domain; 1.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR002483; PWI_dom.
DR   InterPro; IPR036483; PWI_dom_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR034268; RBM25_RRM.
DR   InterPro; IPR000504; RRM_dom.
DR   PANTHER; PTHR47334; SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47334:SF2; SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN; 1.
DR   Pfam; PF01480; PWI; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   SMART; SM00311; PWI; 1.
DR   SMART; SM00360; RRM; 1.
DR   SUPFAM; SSF101233; PWI domain; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS51025; PWI; 1.
DR   PROSITE; PS50102; RRM; 1.
PE   4: Predicted;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT   DOMAIN          213..291
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          830..927
FT                   /note="PWI"
FT                   /evidence="ECO:0000259|PROSITE:PS51025"
FT   REGION          1..69
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          309..361
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          379..499
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          514..534
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          567..599
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          688..709
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          751..811
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        20..35
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        36..69
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        309..348
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        394..408
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        411..499
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        693..709
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   927 AA;  105031 MW;  C523A695C3C977EF CRC64;
     MADSASSPAT LPPNPQPSQS APDLLSQSAT PPSSTPLATN PNPNPTLLPP PPTLHFLAGT
     PPQVPGVLPP SFRPLGPQVP QFSPVPAPNP AYQNPAVPPP GVPGATVAVP PPQMQAMMSY
     QVQPGNPAMR PFAPIPNGYA AAPNVTPAGI PRYPPPYGTM VRPVFPARPP GAVNIPTISR
     PPVAGIPAVR PIIPPVVRPV VAPSVTPAEK PQNTVYIGKI APTVENEFML SLLQLCGTIK
     TWKRPQDLST GTPTSFGFYE FESAEGVLRA LRLLTKLNID GQELKVNVNQ AMKEILELYV
     KTKTENLKNK ETQEVGEKNE GEQPSNANED AKVDTEPSNK EASESSNKES HDVANFGIVT
     DEDREADCEA LEKITKMIEE RLKTRPLPTP PAQPTGDGSV NLTSEQPVKA RDGDSVVDTE
     KNESAENKNE KETNNDNKPT SEHERTESPD RRHDRKSRER DRDRELKREK DRELERYERE
     AERERVRKER EQRRRVEEAE RQYETYLKDW EYREREKEKE RQYEKEKEKE RERKRRKEIL
     YDEEDEDEDS RKRWRRSVIE EKRKKRLREK EDDLVDRQKE EEEIAEAKKK AEEEQKRQRD
     ALKLLSEHVV NGGKENMITE EITNEVKSIV VEQDTVADYS REDHIGDGNS INVIIDESTI
     ASVAPTDAQS GGNAPTKKLG FGLVGSGKRT SVPSVFHEED DDDAHKDKKM RPLVPIDYST
     EELQAVQPTV SGPTPPNLAA AAEFAKRISS TNFKEEKLDG ERDRSRRSNE KSNHRDRSDE
     DGTHNRDENK ERIPGRDRDR DHGSEKLKTS DNKRLLDAKQ LIDMIPKTKE ELFSYEIDWA
     VYDKHQLHDR MRPWISKKIK EFLGEEETTL IDYIVSSTQE HVKASQMLER LQIILDEEAE
     MFVLKMWRML IFEIKKVESG LALRSKS
//
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