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Entry: I1J5K2_SOYBN
LinkDB: I1J5K2_SOYBN
Original site: I1J5K2_SOYBN 
ID   I1J5K2_SOYBN            Unreviewed;       345 AA.
AC   I1J5K2;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   16-OCT-2019, entry version 57.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN   ORFNames=GLYMA_01G041700 {ECO:0000313|EMBL:KRH74760.1};
OS   Glycine max (Soybean) (Glycine hispida).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae;
OC   50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
OC   Phaseoleae; Glycine; Soja.
OX   NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH74760, ECO:0000313|Proteomes:UP000008827};
RN   [1] {ECO:0000313|EMBL:KRH74760.1, ECO:0000313|EnsemblPlants:KRH74760, ECO:0000313|Proteomes:UP000008827}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH74760,
RC   ECO:0000313|Proteomes:UP000008827};
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH74760.1};
RX   PubMed=20075913; DOI=10.1038/nature08670;
RA   Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA   Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U.,
RA   May G.D., Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K.,
RA   Sandhu D., Valliyodan B., Lindquist E., Peto M., Grant D., Shu S.,
RA   Goodstein D., Barry K., Futrell-Griggs M., Abernathy B., Du J.,
RA   Tian Z., Zhu L., Gill N., Joshi T., Libault M., Sethuraman A.,
RA   Zhang X.-C., Shinozaki K., Nguyen H.T., Wing R.A., Cregan P.,
RA   Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.C.,
RA   Jackson S.A.;
RT   "Genome sequence of the palaeopolyploid soybean.";
RL   Nature 463:178-183(2010).
RN   [2] {ECO:0000313|EnsemblPlants:KRH74760}
RP   IDENTIFICATION.
RC   STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH74760};
RG   EnsemblPlants;
RL   Submitted (FEB-2018) to UniProtKB.
RN   [3] {ECO:0000313|EMBL:KRH74760.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH74760.1};
RA   Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W.,
RA   Hyten D., Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G.,
RA   Yu Y., Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D.,
RA   Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA   Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L.,
RA   Gill N., Joshi T., Libault M., Sethuraman A., Zhang X., Shinozaki K.,
RA   Nguyen H., Wing R., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA   Stacey G., Shoemaker R., Jackson S.;
RT   "WGS assembly of Glycine max.";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682,
CC       ECO:0000256|SAAS:SAAS00868163}.
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DR   EMBL; CM000834; KRH74760.1; -; Genomic_DNA.
DR   STRING; 3847.GLYMA01G04890.1; -.
DR   EnsemblPlants; KRH74760; KRH74760; GLYMA_01G041700.
DR   Gramene; KRH74760; KRH74760; GLYMA_01G041700.
DR   eggNOG; KOG0483; Eukaryota.
DR   eggNOG; ENOG410Z2UE; LUCA.
DR   OMA; YDDPPEN; -.
DR   Proteomes; UP000008827; Chromosome 1.
DR   ExpressionAtlas; I1J5K2; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IBA:GO_Central.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR000047; HTH_motif.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008827};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868168};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868171};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868176};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT   DOMAIN       81    141       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND     83    142       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   REGION      183    212       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION      251    298       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COILED      154    181       {ECO:0000256|SAM:Coils}.
FT   COMPBIAS    183    198       Polyampholyte. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
SQ   SEQUENCE   345 AA;  39174 MW;  F16F745C6C6DA6AB CRC64;
     MASGKLYAGS NMSLLLQNER LPCSSEVLES LWAHTSNPAS FQGSKSVVDF ENVNGSRVTD
     RPFFQALEKE ENCDEDYEGC FHQPGKKRRL TSEQVQFLER NFEVENKLEP ERKVQLAKEL
     GLQPRQVAIW FQNRRARFKT KQLEKDYGVL KASYDRLKGD YESLVQENDK LKAEVNSLES
     KLILRDKEKE ENSDDKSSPD DAVNSSPHNN KEPIMDLLIS KNATTSENGT EVSTLPLPIM
     VTCKQEDANS AKSDVLDSDS PHCTDYGNHP SSFVEPADSS HAFEPEDHSE DFSQDEEDNL
     SENFLTLPSS CCLPKVEEPC YDDPPENSCN FGFHVEDQTF CFWPY
//
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