GenomeNet

Database: UniProt
Entry: I1J9H4_SOYBN
LinkDB: I1J9H4_SOYBN
Original site: I1J9H4_SOYBN 
ID   I1J9H4_SOYBN            Unreviewed;       283 AA.
AC   I1J9H4;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   31-JUL-2019, entry version 51.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN   Name=100784129 {ECO:0000313|EnsemblPlants:KRH77172};
GN   ORFNames=GLYMA_01G196600 {ECO:0000313|EMBL:KRH77172.1};
OS   Glycine max (Soybean) (Glycine hispida).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae;
OC   50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
OC   Phaseoleae; Glycine; Soja.
OX   NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH77172, ECO:0000313|Proteomes:UP000008827};
RN   [1] {ECO:0000313|EMBL:KRH77172.1, ECO:0000313|EnsemblPlants:KRH77172, ECO:0000313|Proteomes:UP000008827}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH77172,
RC   ECO:0000313|Proteomes:UP000008827};
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH77172.1};
RX   PubMed=20075913; DOI=10.1038/nature08670;
RA   Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA   Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U.,
RA   May G.D., Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K.,
RA   Sandhu D., Valliyodan B., Lindquist E., Peto M., Grant D., Shu S.,
RA   Goodstein D., Barry K., Futrell-Griggs M., Abernathy B., Du J.,
RA   Tian Z., Zhu L., Gill N., Joshi T., Libault M., Sethuraman A.,
RA   Zhang X.-C., Shinozaki K., Nguyen H.T., Wing R.A., Cregan P.,
RA   Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.C.,
RA   Jackson S.A.;
RT   "Genome sequence of the palaeopolyploid soybean.";
RL   Nature 463:178-183(2010).
RN   [2] {ECO:0000313|EnsemblPlants:KRH77172}
RP   IDENTIFICATION.
RC   STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH77172};
RG   EnsemblPlants;
RL   Submitted (FEB-2018) to UniProtKB.
RN   [3] {ECO:0000313|EMBL:KRH77172.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH77172.1};
RA   Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W.,
RA   Hyten D., Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G.,
RA   Yu Y., Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D.,
RA   Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA   Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L.,
RA   Gill N., Joshi T., Libault M., Sethuraman A., Zhang X., Shinozaki K.,
RA   Nguyen H., Wing R., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA   Stacey G., Shoemaker R., Jackson S.;
RT   "WGS assembly of Glycine max.";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CM000834; KRH77172.1; -; Genomic_DNA.
DR   RefSeq; XP_003517364.1; XM_003517316.3.
DR   SMR; I1J9H4; -.
DR   STRING; 3847.GLYMA01G40450.1; -.
DR   EnsemblPlants; KRH77172; KRH77172; GLYMA_01G196600.
DR   GeneID; 100784129; -.
DR   Gramene; KRH77172; KRH77172; GLYMA_01G196600.
DR   KEGG; gmx:100784129; -.
DR   eggNOG; KOG0483; Eukaryota.
DR   eggNOG; ENOG410Z2UE; LUCA.
DR   KO; K09338; -.
DR   OMA; RERDICG; -.
DR   OrthoDB; 1333079at2759; -.
DR   Proteomes; UP000008827; Chromosome 1.
DR   ExpressionAtlas; I1J9H4; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   SMART; SM00340; HALZ; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000008827};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT   DOMAIN      134    194       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND    136    195       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   COILED      193    230       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   283 AA;  31863 MW;  2AB7B2210DFAEFDC CRC64;
     MGLDQDANSS GLHLVLGLSL TATVKETTQS TKPDDDHHLC VIKPTPTKPY PPNEPSLTLG
     LSGESYHVTK QVLRNNVYCE DPLELSRQTS PHSVVSSFST GRVVKRERDL SCEDIEVEAE
     ERVSSRVSDE DEDGTNARKK LRLTKEQSAL LEESFKQHST LNPKQKQALA RRLNLRPRQV
     EVWFQNRRAR TKLKQTEVDC EFLKKCCETL KDENRRLKKE LQELKALKLA QPLYMPMPAA
     TLTMCPSCDR LGGVNDNGSN KSPFSMAPKP HFYNPFANPS AAC
//
DBGET integrated database retrieval system