ID I1JQA1_SOYBN Unreviewed; 328 AA.
AC I1JQA1;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=Nuclear transcription factor Y subunit {ECO:0000256|RuleBase:RU367155};
GN Name=100527677 {ECO:0000313|EnsemblPlants:KRH68018};
GN ORFNames=GLYMA_03G203000 {ECO:0000313|EMBL:KRH68018.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH68018};
RN [1] {ECO:0000313|EMBL:KRH68018.1, ECO:0000313|EnsemblPlants:KRH68018}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH68018};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH68018.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH68018}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH68018};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH68018.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH68018.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the sequence-specific heterotrimeric
CC transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3'
CC box motif found in the promoters of its target genes.
CC {ECO:0000256|RuleBase:RU367155}.
CC -!- SUBUNIT: Heterotrimer. {ECO:0000256|RuleBase:RU367155}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU367155}.
CC -!- SIMILARITY: Belongs to the NFYA/HAP2 subunit family.
CC {ECO:0000256|RuleBase:RU367155}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000836; KRH68018.1; -; Genomic_DNA.
DR EMBL; CM000836; KRH68019.1; -; Genomic_DNA.
DR EMBL; CM000836; KRH68020.1; -; Genomic_DNA.
DR RefSeq; XP_003521500.1; XM_003521452.3.
DR RefSeq; XP_003521501.1; XM_003521453.3.
DR RefSeq; XP_014629410.1; XM_014773924.1.
DR AlphaFoldDB; I1JQA1; -.
DR STRING; 3847.I1JQA1; -.
DR PaxDb; 3847-GLYMA03G36140-5; -.
DR EnsemblPlants; KRH68018; KRH68018; GLYMA_03G203000.
DR EnsemblPlants; KRH68019; KRH68019; GLYMA_03G203000.
DR EnsemblPlants; KRH68020; KRH68020; GLYMA_03G203000.
DR GeneID; 100527677; -.
DR Gramene; KRH68018; KRH68018; GLYMA_03G203000.
DR Gramene; KRH68019; KRH68019; GLYMA_03G203000.
DR Gramene; KRH68020; KRH68020; GLYMA_03G203000.
DR eggNOG; KOG1561; Eukaryota.
DR HOGENOM; CLU_065504_0_0_1; -.
DR InParanoid; I1JQA1; -.
DR OMA; LEVTSMY; -.
DR OrthoDB; 1119073at2759; -.
DR Proteomes; UP000008827; Chromosome 3.
DR ExpressionAtlas; I1JQA1; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 6.10.250.2430; -; 1.
DR InterPro; IPR001289; NFYA.
DR PANTHER; PTHR12632:SF107; NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT; 1.
DR PANTHER; PTHR12632; TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED; 1.
DR Pfam; PF02045; CBFB_NFYA; 1.
DR PRINTS; PR00616; CCAATSUBUNTB.
DR SMART; SM00521; CBF; 1.
DR PROSITE; PS51152; NFYA_HAP2_2; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU367155};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU367155};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU367155};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|RuleBase:RU367155}.
SQ SEQUENCE 328 AA; 35903 MW; 0A86D45BC95D4848 CRC64;
MQTVYLKEHE GNAHNFVGTL SSAASAPWWS AFGSQSVHQG ESCGQVKPFS LELPNCIDQL
AATKPLARGA DQVLGKGHIT QFTIFPDDCK MSDDAQKLQT TMSLQSSLTD PQSRFEIGFS
LPTICAKYPY TDQFYGLFSA YAPQISGRIM LPLNMTSDDE PIYVNAKQYH GIIRRRQSRA
KAVLDHKLTK RRKPYMHESR HLHAMRRPRG CGGRFLNTKN SVDGNGKIGN EVHKTVGEQL
QSSGSQSSEF LQSEVGTFNS SKETNGSSPN ISGSEVTSMY SRGGLDSFSL NHLGSAVHSF
ADMIDGGRGM IIPTKWVAAA GNCCNLKV
//
