ID I1JR10_SOYBN Unreviewed; 418 AA.
AC I1JR10;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 74.
DE SubName: Full=MYB/HD-like transcription factor {ECO:0000313|EMBL:ALA09210.1};
GN Name=778182 {ECO:0000313|EnsemblPlants:KRH68388};
GN ORFNames=Glyma03g38660.2 {ECO:0000313|EMBL:ALA09210.1},
GN GLYMA_03G227700 {ECO:0000313|EMBL:KRH68388.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:ALA09210.1};
RN [1] {ECO:0000313|EMBL:KRH68388.1, ECO:0000313|EnsemblPlants:KRH68388}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH68388};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH68388.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EMBL:ALA09210.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=26268547; DOI=10.1186/s12864-015-1743-6;
RA Chai C., Wang Y., Joshi T., Valliyodan B., Prince S., Michel L., Xu D.,
RA Nguyen H.T.;
RT "Soybean transcription factor ORFeome associated with drought resistance: a
RT valuable resource to accelerate research on abiotic stress resistance.";
RL BMC Genomics 16:596-596(2015).
RN [3] {ECO:0000313|EnsemblPlants:KRH68388}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH68388};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KRH68388.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH68388.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KT031186; ALA09210.1; -; mRNA.
DR EMBL; CM000836; KRH68388.1; -; Genomic_DNA.
DR EMBL; CM000836; KRH68389.1; -; Genomic_DNA.
DR RefSeq; NP_001304574.1; NM_001317645.1.
DR AlphaFoldDB; I1JR10; -.
DR SMR; I1JR10; -.
DR PaxDb; 3847-GLYMA03G38660-2; -.
DR EnsemblPlants; KRH68388; KRH68388; GLYMA_03G227700.
DR EnsemblPlants; KRH68389; KRH68389; GLYMA_03G227700.
DR GeneID; 778182; -.
DR Gramene; KRH68388; KRH68388; GLYMA_03G227700.
DR Gramene; KRH68389; KRH68389; GLYMA_03G227700.
DR KEGG; gmx:778182; -.
DR eggNOG; KOG0048; Eukaryota.
DR HOGENOM; CLU_028567_10_0_1; -.
DR InParanoid; I1JR10; -.
DR OMA; SDHQFNC; -.
DR OrthoDB; 887435at2759; -.
DR Proteomes; UP000008827; Chromosome 3.
DR ExpressionAtlas; I1JR10; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd00167; SANT; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR47997; MYB DOMAIN PROTEIN 55; 1.
DR PANTHER; PTHR47997:SF75; MYB DOMAIN PROTEIN 55; 1.
DR Pfam; PF00249; Myb_DNA-binding; 2.
DR SMART; SM00717; SANT; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51294; HTH_MYB; 2.
DR PROSITE; PS50090; MYB_LIKE; 2.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 9..65
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 9..61
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 62..112
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 66..116
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT REGION 119..194
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 293..313
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 129..143
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 165..194
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 418 AA; 46704 MW; DF3A2095101913DA CRC64;
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY
LRPDLKRGAF SQQEENSIVE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG
IDPNTHQPLS EIENDKDKPL TADKSNQKAS NEVMSLVEPP KPKPIATTAT TSMPMDRHPL
EVSSTSKISS GNNNSTLDRF DSSITSSDMM GMGYFPFQHL NYGPNMGLTT TPNNTPLCFI
PSSTSSQMMS ELNSTMFHSM FPTHVKPTVS LHSNNNNNPS SISSDGVQNW EVGTISNNNN
NNNASKSNGS SSCSIQLQSS STITWGLQQA ESATKAEQED IKWSEYLNNT PFYLGTTPVQ
HQTTNSLYSS DEVKPETTGF IADESSTMSW HHSQHNFQPS EIYTKDLQRF SVAFGQTL
//
