ID I1JXG3_SOYBN Unreviewed; 660 AA.
AC I1JXG3;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 24-JAN-2024, entry version 61.
DE RecName: Full=DUF4110 domain-containing protein {ECO:0000259|Pfam:PF13422};
GN Name=100818228 {ECO:0000313|EnsemblPlants:KRH63715};
GN ORFNames=GLYMA_04G192600 {ECO:0000313|EMBL:KRH63715.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH63715};
RN [1] {ECO:0000313|EMBL:KRH63715.1, ECO:0000313|EnsemblPlants:KRH63715}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH63715};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH63715.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH63715}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH63715};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH63715.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH63715.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000837; KRH63715.1; -; Genomic_DNA.
DR RefSeq; XP_006578686.1; XM_006578623.2.
DR AlphaFoldDB; I1JXG3; -.
DR SMR; I1JXG3; -.
DR STRING; 3847.I1JXG3; -.
DR PaxDb; 3847-GLYMA04G36770-1; -.
DR EnsemblPlants; KRH63715; KRH63715; GLYMA_04G192600.
DR GeneID; 100818228; -.
DR Gramene; KRH63715; KRH63715; GLYMA_04G192600.
DR KEGG; gmx:100818228; -.
DR eggNOG; KOG1230; Eukaryota.
DR HOGENOM; CLU_008722_1_1_1; -.
DR InParanoid; I1JXG3; -.
DR OrthoDB; 5481217at2759; -.
DR Proteomes; UP000008827; Chromosome 4.
DR ExpressionAtlas; I1JXG3; baseline and differential.
DR Gene3D; 2.120.10.80; Kelch-type beta propeller; 1.
DR InterPro; IPR025183; DUF4110.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR PANTHER; PTHR46063; KELCH DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46063:SF1; KELCH DOMAIN-CONTAINING PROTEIN 4; 1.
DR Pfam; PF13422; DUF4110; 1.
DR Pfam; PF13415; Kelch_3; 2.
DR Pfam; PF13418; Kelch_4; 1.
DR SUPFAM; SSF117281; Kelch motif; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 569..654
FT /note="DUF4110"
FT /evidence="ECO:0000259|Pfam:PF13422"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 372..424
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 490..538
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 638..660
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..35
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 395..409
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 493..533
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 660 AA; 75779 MW; EA0C3B4DC9CD52A8 CRC64;
MGKKTKKPGK GKEKTERKTA RAEEKKARRE TKKLSPEDDI DAILLSIQKE EAKKKEVHVD
DNVPAPSPRS NCSLTVNPLK ETELILYGGE FYNGNKTFVY GDLYRYDVEK LEWKLVSSPN
SPPPRSAHQA VAWKNYVYIF GGEFTSPNQE RFHHYKDFWM LDLKTNQWEQ LNLKGCPSPR
SGHRMVLYKH KIILFGGFYD TLREVRYYND LFVFDLDQFK WQEIKPKPGA MWPTARSGFQ
LFVYQDDIFL YGGYSKEVSS DKSNSEKGIV HSDMWSLDPK TWEWNKVKKS GMPPGPRAGF
SMCVHKRRAL LFGGVVDIEV EGDVMMSLFL NELYGFQLDT NRWYPLELRK EKSTKDKLKK
IEQNCPDDVN KINPACTTRE ETEESEDEEN NIDDISKNIA SNMSIDDGET LTKSEGKAEE
SSAKLDIQSS LPEVVKPCGR INACMAVGRD TLYIYGGMME IKDQEITLDD LYSLNLSKLD
EWKCIIPASE SEWVEASDDD EENEDDDEDE SDGDSLTDED EDDEEEEEEE AQNASVQVGD
AVALIKGVGK NLRRKERRVR IEQIRASLGL SDSQRTPSPG ESLKDFYRRT NMYWQMAAHE
HTQHTGKELR KDGFDLAEAR YRELKPILDE LALLEAEQKA EEAEGPETSA KKRGKKKTRN
//
