ID I1JZM9_SOYBN Unreviewed; 223 AA.
AC I1JZM9;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 64.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN Name=100800105 {ECO:0000313|EnsemblPlants:KRH56891};
GN ORFNames=GLYMA_05G025200 {ECO:0000313|EMBL:KRH56891.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH56891.1};
RN [1] {ECO:0000313|EMBL:KRH56891.1, ECO:0000313|EnsemblPlants:KRH56891}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH56891};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH56891.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH56891}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH56891};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH56891.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH56891.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000838; KRH56891.1; -; Genomic_DNA.
DR RefSeq; XP_003524730.1; XM_003524682.3.
DR AlphaFoldDB; I1JZM9; -.
DR SMR; I1JZM9; -.
DR PaxDb; 3847-GLYMA05G00900-1; -.
DR EnsemblPlants; KRH56891; KRH56891; GLYMA_05G025200.
DR GeneID; 100800105; -.
DR Gramene; KRH56891; KRH56891; GLYMA_05G025200.
DR KEGG; gmx:100800105; -.
DR eggNOG; KOG0800; Eukaryota.
DR HOGENOM; CLU_013137_2_1_1; -.
DR InParanoid; I1JZM9; -.
DR OMA; LACVDKW; -.
DR OrthoDB; 1214611at2759; -.
DR Proteomes; UP000008827; Chromosome 5.
DR CDD; cd23119; RING-H2_NIPL1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR044523; NIP1/2-like.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46151; NEP1-INTERACTING PROTEIN-LIKE 2; 1.
DR PANTHER; PTHR46151:SF18; NEP1-INTERACTING PROTEIN-LIKE 2; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 171..213
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 223 AA; 23919 MW; BB9F0172CA886D62 CRC64;
METGRIQGPW GFRSLSKVVL CTISGALTVC FAIAGALTGA IAGALAAKAT KSGLLRGVSL
GAIAGSILSV EVLEASRAYW CMEQTGSRGA SSMADFIEEL VRGRLVEESL TPAILTAYNL
QFEQVGIANT GYDEIHDVHG LVAPRGLSGD SLKRLPHHMI SKDMKADNTC CAICLQDIEV
GEIARSLPRC HHTFHLICVD KWLVKNDSCP VCRQNVQLVP WAI
//
