UniProt: I1K7L4

Database: UniProt
Entry: I1K7L4_SOYBN

LinkDB:  I1K7L4_SOYBN 
Original site:  I1K7L4_SOYBN

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Ontology (4)   
   GO (4)   
Gene (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (1)   
   EMBL (1)   
Protein domain (3)   
   InterPro (1)   
   Pfam (1)   
   SMART (1)   
Literature (1)   
   PubMed (1)   
All databases (16)   

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ID   I1K7L4_SOYBN            Unreviewed;       337 AA.
AC   I1K7L4;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 66.
DE   RecName: Full=GAGA-binding transcriptional activator {ECO:0000256|RuleBase:RU367160};
GN   Name=100809369 {ECO:0000313|EnsemblPlants:KRH51741};
GN   ORFNames=GLYMA_06G026100 {ECO:0000313|EMBL:KRH51745.1};
OS   Glycine max (Soybean) (Glycine hispida).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC   Glycine subgen. Soja.
OX   NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH51745.1};
RN   [1] {ECO:0000313|EMBL:KRH51745.1, ECO:0000313|EnsemblPlants:KRH51741}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH51741};
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH51745.1};
RX   PubMed=20075913; DOI=10.1038/nature08670;
RA   Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA   Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA   Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA   Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA   Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA   Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA   Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA   Stacey G., Shoemaker R.C., Jackson S.A.;
RT   "Genome sequence of the palaeopolyploid soybean.";
RL   Nature 463:178-183(2010).
RN   [2] {ECO:0000313|EnsemblPlants:KRH51741}
RP   IDENTIFICATION.
RC   STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH51741};
RG   EnsemblPlants;
RL   Submitted (FEB-2018) to UniProtKB.
RN   [3] {ECO:0000313|EMBL:KRH51745.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Callus {ECO:0000313|EMBL:KRH51745.1};
RA   Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA   Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA   Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA   Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA   Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA   Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA   Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA   Jackson S.;
RT   "WGS assembly of Glycine max.";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Transcriptional regulator that specifically binds to GA-rich
CC       elements (GAGA-repeats) present in regulatory sequences of genes
CC       involved in developmental processes. {ECO:0000256|RuleBase:RU367160}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|RuleBase:RU367160}.
CC   -!- SIMILARITY: Belongs to the BBR/BPC family.
CC       {ECO:0000256|ARBA:ARBA00007911, ECO:0000256|RuleBase:RU367160}.
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DR   EMBL; CM000839; KRH51741.1; -; Genomic_DNA.
DR   EMBL; CM000839; KRH51742.1; -; Genomic_DNA.
DR   EMBL; CM000839; KRH51743.1; -; Genomic_DNA.
DR   EMBL; CM000839; KRH51744.1; -; Genomic_DNA.
DR   EMBL; CM000839; KRH51745.1; -; Genomic_DNA.
DR   EMBL; CM000839; KRH51746.1; -; Genomic_DNA.
DR   EMBL; CM000839; KRH51747.1; -; Genomic_DNA.
DR   EMBL; CM000839; KRH51748.1; -; Genomic_DNA.
DR   RefSeq; XP_006581036.1; XM_006580973.2.
DR   RefSeq; XP_006581037.1; XM_006580974.2.
DR   RefSeq; XP_006581039.1; XM_006580976.2.
DR   RefSeq; XP_006581040.1; XM_006580977.2.
DR   RefSeq; XP_006581042.1; XM_006580979.2.
DR   RefSeq; XP_014631661.1; XM_014776175.1.
DR   AlphaFoldDB; I1K7L4; -.
DR   SMR; I1K7L4; -.
DR   STRING; 3847.I1K7L4; -.
DR   PaxDb; 3847-GLYMA06G02880-4; -.
DR   EnsemblPlants; KRH51741; KRH51741; GLYMA_06G026100.
DR   EnsemblPlants; KRH51742; KRH51742; GLYMA_06G026100.
DR   EnsemblPlants; KRH51743; KRH51743; GLYMA_06G026100.
DR   EnsemblPlants; KRH51744; KRH51744; GLYMA_06G026100.
DR   EnsemblPlants; KRH51745; KRH51745; GLYMA_06G026100.
DR   EnsemblPlants; KRH51746; KRH51746; GLYMA_06G026100.
DR   EnsemblPlants; KRH51747; KRH51747; GLYMA_06G026100.
DR   EnsemblPlants; KRH51748; KRH51748; GLYMA_06G026100.
DR   GeneID; 100809369; -.
DR   Gramene; KRH51741; KRH51741; GLYMA_06G026100.
DR   Gramene; KRH51742; KRH51742; GLYMA_06G026100.
DR   Gramene; KRH51743; KRH51743; GLYMA_06G026100.
DR   Gramene; KRH51744; KRH51744; GLYMA_06G026100.
DR   Gramene; KRH51745; KRH51745; GLYMA_06G026100.
DR   Gramene; KRH51746; KRH51746; GLYMA_06G026100.
DR   Gramene; KRH51747; KRH51747; GLYMA_06G026100.
DR   Gramene; KRH51748; KRH51748; GLYMA_06G026100.
DR   eggNOG; ENOG502QSGE; Eukaryota.
DR   HOGENOM; CLU_039119_0_0_1; -.
DR   InParanoid; I1K7L4; -.
DR   OMA; GQWMMQQ; -.
DR   OrthoDB; 991826at2759; -.
DR   Proteomes; UP000008827; Chromosome 6.
DR   ExpressionAtlas; I1K7L4; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0009723; P:response to ethylene; IBA:GO_Central.
DR   InterPro; IPR010409; GAGA-bd_tscrpt_act.
DR   PANTHER; PTHR31421; -; 1.
DR   PANTHER; PTHR31421:SF2; PROTEIN BASIC PENTACYSTEINE6; 1.
DR   Pfam; PF06217; GAGA_bind; 1.
DR   SMART; SM01226; GAGA_bind; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|RuleBase:RU367160};
KW   Nucleus {ECO:0000256|RuleBase:RU367160};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW   Transcription {ECO:0000256|RuleBase:RU367160};
KW   Transcription regulation {ECO:0000256|RuleBase:RU367160}.
FT   REGION          1..22
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          146..191
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..15
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        159..175
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   337 AA;  37455 MW;  8CFE5C5166A04954 CRC64;
     MDDAGHRENG RHKAADQYKS AQGQWLMQHQ PSMKQIMAMI AERDAAIQER NLAISEKKAA
     YAERDMAYMQ RDAAIAERNN AMLERDNAIA TLQYRETSLS SGSMPSCPPG CQISRGVKHV
     HHPQQQVHHI PNMGDASYNT REMHTTEVLP AAPIPSETGK SRRAKRPKEP KSAPPNKKTS
     KPSKKVKKES EDLNNMFGKA HEWKSGQEMV NGGDDLNKQL AVSKADWKGQ DLGLNQVAYD
     ESTMPAPVCS CTGVLRQCYK WGNGGWQSAC CTTTLSMYPL PAVPNKRHAR VGGRKMSGSA
     FNKLLSRLAA ESHDLSNPVD LKDHWAKHGT NRYITIK
//

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