ID I1K9P6_SOYBN Unreviewed; 587 AA.
AC I1K9P6;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=F-box domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100776213 {ECO:0000313|EnsemblPlants:KRH52925};
GN ORFNames=GLYMA_06G095400 {ECO:0000313|EMBL:KRH52925.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH52925.1};
RN [1] {ECO:0000313|EMBL:KRH52925.1, ECO:0000313|EnsemblPlants:KRH52925}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH52925};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH52925.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH52925}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH52925};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH52925.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH52925.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000839; KRH52925.1; -; Genomic_DNA.
DR RefSeq; XP_003526541.1; XM_003526493.3.
DR AlphaFoldDB; I1K9P6; -.
DR SMR; I1K9P6; -.
DR STRING; 3847.I1K9P6; -.
DR PaxDb; 3847-GLYMA06G09990-1; -.
DR EnsemblPlants; KRH52925; KRH52925; GLYMA_06G095400.
DR GeneID; 100776213; -.
DR Gramene; KRH52925; KRH52925; GLYMA_06G095400.
DR KEGG; gmx:100776213; -.
DR eggNOG; KOG1947; Eukaryota.
DR HOGENOM; CLU_022456_1_0_1; -.
DR InParanoid; I1K9P6; -.
DR OMA; DCVGAPF; -.
DR OrthoDB; 3060585at2759; -.
DR Proteomes; UP000008827; Chromosome 6.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR GO; GO:0070887; P:cellular response to chemical stimulus; IEA:UniProt.
DR GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd22159; F-box_AtTIR1-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR041567; COI1_F-box.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR006553; Leu-rich_rpt_Cys-con_subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR041101; Transp_inhibit.
DR PANTHER; PTHR16134; F-BOX/TPR REPEAT PROTEIN POF3; 1.
DR PANTHER; PTHR16134:SF36; TRANSPORT INHIBITOR RESPONSE 1-LIKE PROTEIN; 1.
DR Pfam; PF18511; F-box_5; 1.
DR Pfam; PF18791; Transp_inhibit; 1.
DR SMART; SM00367; LRR_CC; 4.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF52047; RNI-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 19..57
FT /note="COI1 F-box"
FT /evidence="ECO:0000259|Pfam:PF18511"
FT DOMAIN 78..125
FT /note="Transport inhibitor response 1"
FT /evidence="ECO:0000259|Pfam:PF18791"
SQ SEQUENCE 587 AA; 65984 MW; EAAA690E47F0484F CRC64;
MKQIDDGDDE QRSLSPLPEQ VLENVLESVL HFLTSRRDRN AASLVCKSWY RAEALTRPDL
FIGNCYAVSP RRATARFPRV RSLTIKGKPR FADFDLMPLN WGAHFTPWAT ALSQSYPSSL
NKLHLKRMSL TDHDLILLSH SFPSFQDLVL TCCEGFGTTG LAALTSNCRL LRVLELVECV
VEVGDEEMDW ISCFPESDAQ THLESLVFDC VECPVNFDAL ERLVARSPLL RKLRLNRYVS
MSQLHRLMHR APQLTHLGTG SFSASELDQE LDFASAFASC KSLVCLSGFR EFWADYLPAI
YPACANLISL NFSFADISAD QLKSVIRHCH KLQTFWVLDT ICDEGLQAVA ETCKDLRELR
VFPVNTREEI EGPVSEVGFE AISRGCRKLQ SILFFCQRMT NAAVVAMSNN CPDLVVFRLC
IIGQYRPDPV TLEPMDEGFG AIVMNCKKLT RLAVSGLLTD RAFSYIGTYG KLIRTLSVAF
AGDTDLGLQY VLQGCPNLQK LEIRDSPFGD GALHSGLHHF YNMRFLWMSS CKLTRQACQE
VAQTLPHLVL EVINSEEDKA DGIEILYMYR SLDGPRDDAP KVVTILC
//
