ID I1KB73_SOYBN Unreviewed; 390 AA.
AC I1KB73;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE RecName: Full=tRNA-binding domain-containing protein {ECO:0000259|PROSITE:PS50886};
GN Name=100779769 {ECO:0000313|EnsemblPlants:KRH53722};
GN ORFNames=GLYMA_06G142400 {ECO:0000313|EMBL:KRH53722.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH53722.1};
RN [1] {ECO:0000313|EMBL:KRH53722.1, ECO:0000313|EnsemblPlants:KRH53722}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH53722};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH53722.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH53722}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH53722};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH53722.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH53722.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000839; KRH53722.1; -; Genomic_DNA.
DR RefSeq; XP_003526802.1; XM_003526754.3.
DR AlphaFoldDB; I1KB73; -.
DR SMR; I1KB73; -.
DR STRING; 3847.I1KB73; -.
DR PaxDb; 3847-GLYMA06G14760-1; -.
DR EnsemblPlants; KRH53722; KRH53722; GLYMA_06G142400.
DR GeneID; 100779769; -.
DR Gramene; KRH53722; KRH53722; GLYMA_06G142400.
DR KEGG; gmx:100779769; -.
DR eggNOG; KOG2241; Eukaryota.
DR HOGENOM; CLU_061291_0_0_1; -.
DR InParanoid; I1KB73; -.
DR OMA; IICENMD; -.
DR OrthoDB; 315782at2759; -.
DR Proteomes; UP000008827; Chromosome 6.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd10304; GST_C_Arc1p_N_like; 1.
DR CDD; cd02799; tRNA_bind_EMAP-II_like; 1.
DR Gene3D; 1.20.1050.130; -; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR036282; Glutathione-S-Trfase_C_sf.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR002547; tRNA-bd_dom.
DR PANTHER; PTHR11586:SF46; AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN 1; 1.
DR PANTHER; PTHR11586; TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER; 1.
DR Pfam; PF01588; tRNA_bind; 1.
DR SUPFAM; SSF47616; GST C-terminal domain-like; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50886; TRBD; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00209};
KW tRNA-binding {ECO:0000256|ARBA:ARBA00022555, ECO:0000256|PROSITE-
KW ProRule:PRU00209}.
FT DOMAIN 229..332
FT /note="TRNA-binding"
FT /evidence="ECO:0000259|PROSITE:PS50886"
FT REGION 164..223
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 183..223
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 390 AA; 42371 MW; 75D5007A13B6DB5F CRC64;
MATVESRSKS VVLALSKYLS LDPSVVPADT SDSDIKSLYL NIIAVSGHGV NHSDEVLKWV
AFAEAFPVAL DACFENLNRL NDELSEKSVL LGNGLKPSEA DVIVYSVIHS SLINLSDTNK
EKLPHVLRWM DYIQHKQEFV GLFEKILLQK PGFEPPVTQP VGAVEADLKS NKTEQSVKNV
NKSEVDSSKD KNKAEGKATG GKSTGDKEPT KAKAKPADKE VAEKENEVSV SLLNIQVGLI
RKAWKHPSAD SLLVEEIDVG EDKVRQVVSG LAKYCNPDEL TNRRVVLITN VKPGKLRDVM
SQGLVLCASD EGPTIVEPLL PPEGSQIGER ISFSGIDGKP EDVLNPKKKQ LDKITPHLFT
DDKGVATYKG IPFMTSGGPC TSSIPRATIK
//
