ID I1KBU6_SOYBN Unreviewed; 950 AA.
AC I1KBU6;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 68.
DE RecName: Full=Clp R domain-containing protein {ECO:0000259|PROSITE:PS51903};
GN Name=100793074 {ECO:0000313|EnsemblPlants:KRH54048};
GN ORFNames=GLYMA_06G162200 {ECO:0000313|EMBL:KRH54048.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH54048};
RN [1] {ECO:0000313|EMBL:KRH54048.1, ECO:0000313|EnsemblPlants:KRH54048}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH54048};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH54048.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH54048}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH54048};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH54048.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH54048.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CM000839; KRH54048.1; -; Genomic_DNA.
DR RefSeq; XP_003526908.1; XM_003526860.3.
DR AlphaFoldDB; I1KBU6; -.
DR SMR; I1KBU6; -.
DR STRING; 3847.I1KBU6; -.
DR PaxDb; 3847-GLYMA06G17020-1; -.
DR EnsemblPlants; KRH54048; KRH54048; GLYMA_06G162200.
DR GeneID; 100793074; -.
DR Gramene; KRH54048; KRH54048; GLYMA_06G162200.
DR KEGG; gmx:100793074; -.
DR eggNOG; KOG1051; Eukaryota.
DR HOGENOM; CLU_005070_4_2_1; -.
DR InParanoid; I1KBU6; -.
DR OrthoDB; 275944at2759; -.
DR Proteomes; UP000008827; Chromosome 6.
DR ExpressionAtlas; I1KBU6; baseline and differential.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF185; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|RuleBase:RU004432};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 87..247
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT REGION 254..280
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 261..280
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 950 AA; 104244 MW; 974A38FBF2557739 CRC64;
MQVSSSWFGT IVLSNRYSRN RSLPLEPCST TTTSSVSATS YPPLFTRPYS SLSFLVSQRK
GFTLTSLSPI RTNKKRRRAS LRVSAVFERF TERAIKAIVL SQREAKALGS ELVYTQHLLL
GLIAEEDRSS DGFLASGVTV EKAREVVRSV WLRNGSARAG SGAARAGVDD DGSKASATQV
PFSVNAKRVF EAAFEYSKSL GHKFVGPEHI TVGLVKVDDG SVSRVLYRLG TNGSQLASVA
FSRLQKEIAK DGREPNVISK GVPNKSISRK GSDAGASATT GEESALSQFC VDLTARASEG
RIDPVVGREV EVQRIIQILC RKTKSNPILL GEAGVGKTAI AEGMALRIAK ADVAPFLLTK
RVMSLDIALL MAGAKERGEL EERVTKLVKD IIKSGDVILF IDEVHILVQA GTIGRGNKGS
GLDIANLLKP ALGRGQFQCI ASTTLDEYRL YFEKDTALAR RFQPVWVDEP SEDDAIKILM
GLREKYEAHH KCRYTAEAIK AAVDLSARYI VDRYLPDKAI DLIDEAGSRA CIEAFKKKKE
HETGILSKCP ADYWQEIKDV KSMHEMENKL KYYGASSIDD TNELILDSYL SSTTTDNEPI
EVGPEDIAAV ASLWSGIPVQ KLTADQRILL LDLENQLRKR VIGQEEAVAA ISRAVKRSRV
GLKDPDRPIA AMLFCGPTGV GKTELAKSLA ACYFGSEAAM VRLDMSEYME RHTVSKLIGS
PPGYVGYGEG GVLTEAIRRK PFTLLLLDEI EKAHPDIFNI LLQILEDGQL TDSQGRRVSF
KNALVVMTSN VGSSAIAKGR HNSIGFLIPD DKTTSYNGLK SMVIEELRSY FRPELLNRID
EVVVFQPLEK SQLLQILDLL LQDMKKRVLS LGVHVKVSEA VKNLVCQQGY NPTYGARPLR
RAITSLIEDP LSEAFLYGEC KQGDTVLIDL DANGNPFVTN QLDQIVNLSD
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