ID I1KDV5_SOYBN Unreviewed; 416 AA.
AC I1KDV5;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=PGG domain-containing protein {ECO:0000259|Pfam:PF13962};
GN Name=100777104 {ECO:0000313|EnsemblPlants:KRH55268};
GN ORFNames=GLYMA_06G241600 {ECO:0000313|EMBL:KRH55268.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH55268.1};
RN [1] {ECO:0000313|EMBL:KRH55268.1, ECO:0000313|EnsemblPlants:KRH55268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH55268};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH55268.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH55268}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH55268};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH55268.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH55268.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000839; KRH55268.1; -; Genomic_DNA.
DR RefSeq; XP_006582164.1; XM_006582101.2.
DR AlphaFoldDB; I1KDV5; -.
DR SMR; I1KDV5; -.
DR STRING; 3847.I1KDV5; -.
DR PaxDb; 3847-GLYMA06G36910-1; -.
DR EnsemblPlants; KRH55268; KRH55268; GLYMA_06G241600.
DR GeneID; 100777104; -.
DR Gramene; KRH55268; KRH55268; GLYMA_06G241600.
DR KEGG; gmx:100777104; -.
DR eggNOG; KOG0504; Eukaryota.
DR HOGENOM; CLU_000134_47_1_1; -.
DR InParanoid; I1KDV5; -.
DR OMA; HFAMEMM; -.
DR OrthoDB; 906956at2759; -.
DR Proteomes; UP000008827; Chromosome 6.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR026961; PGG_dom.
DR PANTHER; PTHR24128:SF117; ANKYRIN REPEAT FAMILY PROTEIN; 1.
DR PANTHER; PTHR24128; HOMEOBOX PROTEIN WARIAI; 1.
DR Pfam; PF00023; Ank; 1.
DR Pfam; PF12796; Ank_2; 2.
DR Pfam; PF13962; PGG; 1.
DR SMART; SM00248; ANK; 5.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 3.
DR PROSITE; PS50088; ANK_REPEAT; 3.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 269..286
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 332..354
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 361..383
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 389..412
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 71..98
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 105..127
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 139..161
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 264..359
FT /note="PGG"
FT /evidence="ECO:0000259|Pfam:PF13962"
SQ SEQUENCE 416 AA; 46888 MW; B2FF2E809D602906 CRC64;
MSSDALKVAA EGNNIDGLYQ EIQQDPRILE SIDSIPFVET PLHVAATLGH FEFATEIMTL
KPSFAQKLNP EGFTPIHLAL QCNHDEMVLR LVEMNKDLVR VKGREGFTPL HLASQENKTE
LLHKFLKACP DSIEDVTARS ETALHIAVKH GHYEILQVLF RWLKRNSRKD SLKFIRTMLN
WKDQKGNTVV HVAALNDHIE AVSLLLTMVD LDAKNSEGKT ASDIASSDHM KSILIKDLGF
FESLALLRNK FRNFFLRFRR YMTEEERNAY LVVAALIATA TYQAALSPPG GLYPSDVGTN
NNTSHVVAST HSINDKSSIP KDGNSIMSAT EFSLFSVANT CSFMSSTFAI ILLLPMTNVM
WILLYSPPFF LQLSFFIAMM VISPTPLNVY VVTIFLAVYM LLFYSFLPFT YYKLLE
//
