ID I1KTK0_SOYBN Unreviewed; 232 AA.
AC I1KTK0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE RecName: Full=Large ribosomal subunit protein uL6 N-terminal domain-containing protein {ECO:0000259|Pfam:PF03868};
GN Name=100811720 {ECO:0000313|EnsemblPlants:KRH43467};
GN ORFNames=GLYMA_08G151900 {ECO:0000313|EMBL:KRH43467.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH43467};
RN [1] {ECO:0000313|EMBL:KRH43467.1, ECO:0000313|EnsemblPlants:KRH43467}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH43467};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH43467.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH43467}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH43467};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH43467.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH43467.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL6 family.
CC {ECO:0000256|ARBA:ARBA00010592}.
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DR EMBL; CM000841; KRH43467.1; -; Genomic_DNA.
DR RefSeq; XP_003531428.1; XM_003531380.3.
DR AlphaFoldDB; I1KTK0; -.
DR SMR; I1KTK0; -.
DR STRING; 3847.I1KTK0; -.
DR PaxDb; 3847-GLYMA08G16130-1; -.
DR EnsemblPlants; KRH43467; KRH43467; GLYMA_08G151900.
DR GeneID; 100811720; -.
DR Gramene; KRH43467; KRH43467; GLYMA_08G151900.
DR KEGG; gmx:100811720; -.
DR eggNOG; KOG1694; Eukaryota.
DR HOGENOM; CLU_066767_1_0_1; -.
DR InParanoid; I1KTK0; -.
DR OMA; RPHEMIF; -.
DR OrthoDB; 5483341at2759; -.
DR Proteomes; UP000008827; Chromosome 8.
DR ExpressionAtlas; I1KTK0; baseline and differential.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR CDD; cd13156; KOW_RPL6; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR InterPro; IPR000915; 60S_ribosomal_eL6.
DR InterPro; IPR014722; Rib_uL2_dom2.
DR InterPro; IPR041997; Ribosomal_eL6_KOW.
DR InterPro; IPR005568; Ribosomal_uL6_N.
DR InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR PANTHER; PTHR10715; 60S RIBOSOMAL PROTEIN L6; 1.
DR PANTHER; PTHR10715:SF0; 60S RIBOSOMAL PROTEIN L6; 1.
DR Pfam; PF01159; Ribosomal_L6e; 1.
DR Pfam; PF03868; Ribosomal_L6e_N; 1.
DR SUPFAM; SSF50104; Translation proteins SH3-like domain; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980}.
FT DOMAIN 4..60
FT /note="Large ribosomal subunit protein uL6 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03868"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 44..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 232 AA; 25889 MW; E2AC8F891CE6C42A CRC64;
MAPKKPRTTS RNPDLVRGIG KYSRSQMYHK RGIWAIKAKN GGVLPLHDPK PKPEAPAQKP
PKFYPADDVK KPLVNKHKPK PAKLRASITP GTVLILLAGR FKGKRVVFLK QLPSGLLLVT
GPFKINGVPL RRVNQSYVIG TSTKVDISDV NVDKFDDKYF AKEAKKKKTK GEGEFFEAEK
EEKNVLPQEK KDDQKTVDTA LLKAIESVPE LKSYLGARFS LKAGVKPHEL VF
//