ID I1KWB3_SOYBN Unreviewed; 604 AA.
AC I1KWB3;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100782677 {ECO:0000313|EnsemblPlants:KRH44954};
GN ORFNames=GLYMA_08G241100 {ECO:0000313|EMBL:KRH44954.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH44954.1};
RN [1] {ECO:0000313|EMBL:KRH44954.1, ECO:0000313|EnsemblPlants:KRH44954}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH44954};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH44954.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH44954}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH44954};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH44954.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH44954.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000841; KRH44954.1; -; Genomic_DNA.
DR RefSeq; XP_003530418.1; XM_003530370.3.
DR AlphaFoldDB; I1KWB3; -.
DR SMR; I1KWB3; -.
DR STRING; 3847.I1KWB3; -.
DR PaxDb; 3847-GLYMA08G26270-2; -.
DR EnsemblPlants; KRH44954; KRH44954; GLYMA_08G241100.
DR Gramene; KRH44954; KRH44954; GLYMA_08G241100.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_6_1; -.
DR InParanoid; I1KWB3; -.
DR OMA; DGIHEFT; -.
DR OrthoDB; 444628at2759; -.
DR Proteomes; UP000008827; Chromosome 8.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 187..217
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 218..252
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 280..314
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 382..416
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 604 AA; 67750 MW; 20703F1679A74050 CRC64;
MQMQVPVGGR VPTWFSRQRL LEEKLCDLHK CSNLDSVNQI HAQVLKANLH QDLFVAPKLI
AAFSLCRHLA SAVNVFNHVP HPNVHLYNSI IRAHAHNTSH PSLPFNAFFQ MQKNGLFPDN
FTYPFLLKAC TGPSSLPLVR MIHAHVEKFG FYGDIFVPNS LIDSYSRCGS AGLDGAMSLF
LAMKERDVVT WNSMIGGLVR CGELEGACKL FDEMPERDMV SWNTMLDGYA KAGEMDRAFE
LFERMPQRNI VSWSTMVCGY SKGGDMDMAR VLFDRCPAKN VVLWTTIIAG YAEKGFVREA
TELYGKMEEA GLRPDDGFLI SILAACAESG MLGLGKRIHA SMRRWRFRCG TKVLNAFIDM
YAKCGCLDAA FDVFSGMMAK KDVVSWNSMI QGFAMHGHGE KALELFSRMV PEGFEPDTYT
FVGLLCACTH AGLVNEGRKY FYSMEKVYGI VPQVEHYGCM MDLLGRGGHL KEAFTLLRSM
PMEPNAIILG TLLNACRMHN DVDFARAVCE QLFKVEPTDP GNYSLLSNIY AQAGDWMNVA
NVRLQMMNTG GQKPSGASSI EVEEEVHEFT VFDQSHPKSD DIYKMIDRLV QDLRQVGYVP
MIHQ
//
