ID I1L3P9_SOYBN Unreviewed; 892 AA.
AC I1L3P9;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 67.
DE RecName: Full=GYF domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100779294 {ECO:0000313|EnsemblPlants:KRH38796};
GN ORFNames=GLYMA_09G158300 {ECO:0000313|EMBL:KRH38796.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH38796.1};
RN [1] {ECO:0000313|EMBL:KRH38796.1, ECO:0000313|EnsemblPlants:KRH38796}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH38796};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH38796.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH38796}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH38796};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH38796.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH38796.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000842; KRH38796.1; -; Genomic_DNA.
DR EMBL; CM000842; KRH38797.1; -; Genomic_DNA.
DR RefSeq; XP_003533272.2; XM_003533224.3.
DR AlphaFoldDB; I1L3P9; -.
DR SMR; I1L3P9; -.
DR STRING; 3847.I1L3P9; -.
DR PaxDb; 3847-GLYMA09G28660-1; -.
DR EnsemblPlants; KRH38796; KRH38796; GLYMA_09G158300.
DR EnsemblPlants; KRH38797; KRH38797; GLYMA_09G158300.
DR GeneID; 100779294; -.
DR Gramene; KRH38796; KRH38796; GLYMA_09G158300.
DR Gramene; KRH38797; KRH38797; GLYMA_09G158300.
DR KEGG; gmx:100779294; -.
DR eggNOG; KOG1862; Eukaryota.
DR eggNOG; KOG1946; Eukaryota.
DR HOGENOM; CLU_019956_0_0_1; -.
DR InParanoid; I1L3P9; -.
DR OMA; WEATCMT; -.
DR OrthoDB; 50760at2759; -.
DR Proteomes; UP000008827; Chromosome 9.
DR ExpressionAtlas; I1L3P9; baseline and differential.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd10567; SWIB-MDM2_like; 1.
DR Gene3D; 3.30.1490.40; -; 1.
DR Gene3D; 3.90.70.200; Plus-3 domain; 1.
DR Gene3D; 1.10.245.10; SWIB/MDM2 domain; 1.
DR InterPro; IPR045894; At5g08430-like.
DR InterPro; IPR003169; GYF.
DR InterPro; IPR035445; GYF-like_dom_sf.
DR InterPro; IPR004343; Plus-3_dom.
DR InterPro; IPR036128; Plus3-like_sf.
DR InterPro; IPR036885; SWIB_MDM2_dom_sf.
DR InterPro; IPR003121; SWIB_MDM2_domain.
DR PANTHER; PTHR46851; OS01G0884500 PROTEIN; 1.
DR PANTHER; PTHR46851:SF11; PLUS3 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02213; GYF; 1.
DR Pfam; PF03126; Plus-3; 1.
DR Pfam; PF02201; SWIB; 1.
DR SMART; SM00444; GYF; 1.
DR SMART; SM00719; Plus3; 1.
DR SUPFAM; SSF55277; GYF domain; 1.
DR SUPFAM; SSF159042; Plus3-like; 1.
DR SUPFAM; SSF47592; SWIB/MDM2 domain; 1.
DR PROSITE; PS50829; GYF; 1.
DR PROSITE; PS51360; PLUS3; 1.
DR PROSITE; PS51925; SWIB_MDM2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 37..120
FT /note="DM2"
FT /evidence="ECO:0000259|PROSITE:PS51925"
FT DOMAIN 171..297
FT /note="Plus3"
FT /evidence="ECO:0000259|PROSITE:PS51360"
FT DOMAIN 830..884
FT /note="GYF"
FT /evidence="ECO:0000259|PROSITE:PS50829"
FT REGION 561..585
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 612..637
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 654..689
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 612..627
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 654..668
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 892 AA; 102266 MW; ADAD9146472D97CA CRC64;
MIGRMGDEPR AGSFWTEEIN EAVPTPMRRK RKYRTKKKEY QGWGSTSLIW FLESIGRDTS
TKIAQSEVAN IVMEYVKQHN LFHKTKKKRI ECDERLHSLF GRKTISRLKI NDLLESHFKE
NCEESSDGVF FDSEDDENAL TACETPRTAP SERKSQPKKP VFEKPRSCFA AIVPANIKLV
YMKRSLVMDL LKDPETFETK VVGSFIRIRC DPNDYLQKNS HQLLQVTGTK KSSEVNGEIH
LQVSGFIKDI RIQMLSDDNF SEEECENLHQ RVKDGLVKRP MIVDMEQTAR VLHEDMIKHW
LAREFILLQN LIDRANEKGW RRELDEYLRR REKLQSPDEQ ERLLREFPQV IADEQESEST
TPDVLDKNVE NNLQEFWQAT YTKSSSVTEV PNEVANSKLD IADLVKQQSN SPKSIPILHR
APEVPLLDMT NNSTMLNCIS RDTIEHQSRG LSVQLPPEQH TVFAYKNYMS KPGDSQALPD
KQMWSPQIQV IRLSNGLSVR QSPEQQTDIA YKNDMSKPAN SHEAKISQAL PDKQMWSSQI
RAIRLSDGLP VQQSPEQQTD FAYKNGTSKP AESQEEKISQ ALPNKQIRPA QLEFIELSDD
LSVQQPPEQQ TNFTYKNDMS KPANSHEAKI SQALPDKQMW SSQIRAIRLS DGLPVQQSPE
QQTDFAYKNG PSKPAKSQEE KISQALPNKQ IRPSQLEFIE LSDDLSVQQP PEQQTNFTYK
NDMSKPSELH EVKISQALPN KQMLQSQLDV IELSDGLPVQ QPPEQQISFA YNNGTSKPAE
SHEAKISQAL PNKQIQSSQI QVIELSDDDE DEENKKQSTT KLVPAVQLDT LMWHYRDPTG
NVQGPFSLIS LKRWSDAGYF PRGFKVWQSG NRQDEDVLLV NILAQFAQFF PF
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