ID I1L6G7_SOYBN Unreviewed; 484 AA.
AC I1L6G7;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE RecName: Full=Pectate lyase superfamily protein domain-containing protein {ECO:0000259|Pfam:PF12708};
GN Name=100776827 {ECO:0000313|EnsemblPlants:KRH40394};
GN ORFNames=GLYMA_09G256100 {ECO:0000313|EMBL:KRH40394.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH40394};
RN [1] {ECO:0000313|EMBL:KRH40394.1, ECO:0000313|EnsemblPlants:KRH40394}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH40394};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH40394.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH40394}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH40394};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH40394.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH40394.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 28 family.
CC {ECO:0000256|ARBA:ARBA00008834, ECO:0000256|RuleBase:RU361169}.
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DR EMBL; CM000842; KRH40394.1; -; Genomic_DNA.
DR RefSeq; XP_003533597.1; XM_003533549.3.
DR AlphaFoldDB; I1L6G7; -.
DR SMR; I1L6G7; -.
DR PaxDb; 3847-GLYMA09G39200-1; -.
DR EnsemblPlants; KRH40394; KRH40394; GLYMA_09G256100.
DR GeneID; 100776827; -.
DR Gramene; KRH40394; KRH40394; GLYMA_09G256100.
DR KEGG; gmx:100776827; -.
DR eggNOG; ENOG502QPMF; Eukaryota.
DR HOGENOM; CLU_016031_8_0_1; -.
DR InParanoid; I1L6G7; -.
DR OMA; YNSHADT; -.
DR OrthoDB; 5489079at2759; -.
DR Proteomes; UP000008827; Chromosome 9.
DR GO; GO:0004650; F:polygalacturonase activity; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 2.160.20.10; Single-stranded right-handed beta-helix, Pectin lyase-like; 1.
DR InterPro; IPR000743; Glyco_hydro_28.
DR InterPro; IPR024535; Pectate_lyase_SF_prot.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR PANTHER; PTHR31339:SF50; PECTIN LYASE-LIKE SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR31339; PECTIN LYASE-RELATED; 1.
DR Pfam; PF00295; Glyco_hydro_28; 1.
DR Pfam; PF12708; Pectate_lyase_3; 1.
DR SUPFAM; SSF51126; Pectin lyase-like; 1.
PE 3: Inferred from homology;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295, ECO:0000256|RuleBase:RU361169};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU361169};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..33
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 34..484
FT /note="Pectate lyase superfamily protein domain-containing
FT protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5014578076"
FT DOMAIN 57..113
FT /note="Pectate lyase superfamily protein"
FT /evidence="ECO:0000259|Pfam:PF12708"
SQ SEQUENCE 484 AA; 53226 MW; 92EC4076D5E7ACDF CRC64;
MEFLWKTLMR IHVIRTFFAL LLVALLSSEG VESRKAKVVT TSLEYNAINC RAHSASLTDF
GGVGDGKASN TKAFQSAISH LSQYASEGGS QLYVPAGKWL TGSFSLTSHF TLYLDKDAVL
LASQDITEWP VLEPLPSYGR GRDAPAGRFT SLIFGTNLTD VIVTGENGTI DGQGEFWWQQ
FHRKKLKYTR PYLIELMFSD NIQISNLTLL NSPSWNVHPV YSSNIIVQGI TIFAPVTSPN
TDGINPDSCT NVRIEDCYIV SGDDCVAVKS GWDEYGIKFG WPTKQLMIRR LTCISPYSAT
IALGSEMSGG IQDVRAEDIT AIQTESGVRI KTAVGRGGYV KDIYVKRMTL HTMKWAFKMT
GDYNSHADSH YDPNALPEIK NINYRDVVAE NVTIAARFQG ISNDPFTGIC IANVTLRMAA
KAKKQPWTCT DIEGMTSGVT PPPCGLLPDQ GPEKITACDF PADSLPIDML ELKKCTTTMT
FVGV
//
