ID I1L8X8_SOYBN Unreviewed; 1502 AA.
AC I1L8X8;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 24-JAN-2024, entry version 56.
DE RecName: Full=Nuclear pore complex protein NUP160 domain-containing protein {ECO:0000259|Pfam:PF17238};
GN Name=100817671 {ECO:0000313|EnsemblPlants:KRH32509};
GN ORFNames=GLYMA_10G055100 {ECO:0000313|EMBL:KRH32509.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH32509};
RN [1] {ECO:0000313|EMBL:KRH32509.1, ECO:0000313|EnsemblPlants:KRH32509}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH32509};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH32509.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH32509}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH32509};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH32509.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH32509.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000843; KRH32509.1; -; Genomic_DNA.
DR RefSeq; XP_006588790.1; XM_006588727.2.
DR AlphaFoldDB; I1L8X8; -.
DR STRING; 3847.I1L8X8; -.
DR PaxDb; 3847-GLYMA10G06230-1; -.
DR EnsemblPlants; KRH32509; KRH32509; GLYMA_10G055100.
DR GeneID; 100817671; -.
DR Gramene; KRH32509; KRH32509; GLYMA_10G055100.
DR KEGG; gmx:100817671; -.
DR eggNOG; KOG4521; Eukaryota.
DR HOGENOM; CLU_004612_0_1_1; -.
DR InParanoid; I1L8X8; -.
DR OMA; ACEFACA; -.
DR OrthoDB; 342363at2759; -.
DR Proteomes; UP000008827; Chromosome 10.
DR ExpressionAtlas; I1L8X8; baseline and differential.
DR GO; GO:0005643; C:nuclear pore; IBA:GO_Central.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IBA:GO_Central.
DR GO; GO:0033036; P:macromolecule localization; IEA:UniProt.
DR GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0071705; P:nitrogen compound transport; IEA:UniProt.
DR GO; GO:0071702; P:organic substance transport; IEA:UniProt.
DR InterPro; IPR021717; Nucleoporin_Nup160.
DR InterPro; IPR035192; NUP160.
DR PANTHER; PTHR21286; NUCLEAR PORE COMPLEX PROTEIN NUP160; 1.
DR PANTHER; PTHR21286:SF0; NUCLEAR PORE COMPLEX PROTEIN NUP160; 1.
DR Pfam; PF17238; DUF5311; 1.
DR Pfam; PF11715; Nup160; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 545..738
FT /note="Nuclear pore complex protein NUP160"
FT /evidence="ECO:0000259|Pfam:PF17238"
SQ SEQUENCE 1502 AA; 169391 MW; AEB7C6590347FC4D CRC64;
MGTGSTLAGK EVPIVGSDAV RWIDLSVPSS SNIAAVDGVA ALPTTDDRAS CFVIGDPPTY
LIWRIHKAQP QSLELLELAA SKEFPRVGLR FTFPDALCPF AFIGKNEISG ASRFPYLLYV
LTVSGVAYLL KIRNVSAYTS VSVFPVDELL EVNVRDYIPN HATAITTVMA TVGGLVVGTS
DGSVFCFQLG VVDPSAPGFM HELRDEAGIS RLWGLISRGK MVGTVQELVI LELHEKKFVF
VLHLDGTLRI WDLASRSRVF SNNMGTVTMA AGATFVKLWV GQPYPDSNII PLAVLYRDTS
DENLEMISLY SILYNFGDRI VFSMDPSVQS IPLEEGRCLD VKLTLDKIWI LKDDELVSHT
FSTNIDEVEA FSYALQEEFV ADQLFQSSEH LADEILRITH SIFKSSKDDI FPFVSSIFLR
RLLLPGVHHN ATLYATLLEY SRHLGESELQ TLTADGLKKE ILSLIEHEVG SEKVSLLHCW
KCFFTRYFHN WCKNNALYGL LVDSSSDAIG LIRKNSISLF RSLEDIERIV EVGSSEEVSE
LTGLVDIFND DLDCDILIEL LRCVISFSQQ LGKTASSIFY ESLLTTSVIS SEDIVRYIVK
ILETGYCMSG PVLQTSTSGD HIVVLEKELA DHKSLRKLSI DMFLSLQGLH KKASAWGRIL
KVIEGFLKFL VPQKVIQNFN TEVSSNINSS VIVHTTFQIA KVMFESAWDF LLFLSYLVDI
SGQVHLLHDD INKIQLDLVP MLQEIIFEWL IIIFFTITPS APAVTEDFNS KLSSLQIDNN
MGKRLWNEKL GRYDFTLAYT FLLNVGSSSL DHSHYSSEHF SNVQSFINKT RDFISWIIWG
QTGGSSTFLT RSIDLAFILF KHDQYGAAEQ LLMIAEAHLL KEKTSQSIQD DDGGWCIRHH
LLGCCLLAQV QCGLHATQKD KKVSEAIRCF FRSSSGNGAS EALQSLSDDL GIPYLGFNGC
TSIAAWKLQY YQWAMQLFER YSISEGACQF ALAALEQVDE ALYMKDDKCT NNSVNESVTT
IKGRLWANVF IFVLDLGRYY DAYCAIISNP DEESKYICLR RFIIVLYEQG AIKILCSNKL
PLIGLVEKVE QELAWKAERS DISAKPNLYK LLYAFQLHRH NWRRAASYMY LYSARLRTEA
ALKDSVGSSL MLQERLNALS SAVNALHLVH PAYAWIDSLA EGSYLVNEYY PSKKAKRTPD
EHSAADNDAE PQGWQSSIDI EKLENEFVLT SAEYMLSLVN FKWTFSGKHG ALSDLADLLV
QNNLYDMAFT ILLRFFKGSG LKRELERVLS AISLKCCLDK VESSWVEEHS HLLTSSKHEM
VAHGSPATVS TTPQTDRNSC WATLKLYLEK YKEFHGRLPI IVAETLLRTD PKIELPLWLV
QLFKEGQKER LWGMAGRESN PASLFQLYVS YDRYAEATYL LLDCIDSFAS MRPADIIRRK
RPLAVWFPYT TIERLLYQLD ELIRMGRMVD HCDKLKKMLH DSLQNHLKML KVDSDDAVSV
SS
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