ID I1LDJ8_SOYBN Unreviewed; 643 AA.
AC I1LDJ8;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 69.
DE RecName: Full=Anaphase-promoting complex subunit 4-like WD40 domain-containing protein {ECO:0000259|Pfam:PF12894};
GN Name=100788591 {ECO:0000313|EnsemblPlants:KRH35210};
GN ORFNames=GLYMA_10G228700 {ECO:0000313|EMBL:KRH35210.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH35210};
RN [1] {ECO:0000313|EMBL:KRH35210.1, ECO:0000313|EnsemblPlants:KRH35210}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH35210};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH35210.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH35210}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH35210};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH35210.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH35210.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000843; KRH35210.1; -; Genomic_DNA.
DR RefSeq; XP_006589513.1; XM_006589450.2.
DR AlphaFoldDB; I1LDJ8; -.
DR SMR; I1LDJ8; -.
DR STRING; 3847.I1LDJ8; -.
DR PaxDb; 3847-GLYMA10G37310-2; -.
DR EnsemblPlants; KRH35210; KRH35210; GLYMA_10G228700.
DR GeneID; 100788591; -.
DR Gramene; KRH35210; KRH35210; GLYMA_10G228700.
DR KEGG; gmx:100788591; -.
DR HOGENOM; CLU_022078_2_0_1; -.
DR InParanoid; I1LDJ8; -.
DR OMA; KMYLVNA; -.
DR OrthoDB; 5482780at2759; -.
DR Proteomes; UP000008827; Chromosome 10.
DR ExpressionAtlas; I1LDJ8; baseline.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR024977; Apc4-like_WD40_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR47198; OS05G0299300 PROTEIN; 1.
DR PANTHER; PTHR47198:SF1; WD_REPEATS_REGION DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF12894; ANAPC4_WD40; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT REPEAT 327..368
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 474..527
FT /note="Anaphase-promoting complex subunit 4-like WD40"
FT /evidence="ECO:0000259|Pfam:PF12894"
FT REPEAT 515..550
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 609..643
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 219..251
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 219..234
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 643 AA; 71272 MW; AFD0DBCC9DC10239 CRC64;
MEKKMQHAEE LVREFLVFRG FTNTLESYDA ELRTDIGKGF EVDKILDLIF SLYVPKFHAD
SLLALLGFFK HYLSSSSDSP LLSTLSKLET SLLRFYVVHA VQCNRNDKVV DFFALYGAEL
LQSSQDWTHW FAIPYKKNPH LDPEFRVFFS KEWYQALHLS SRNFFSEVFN ATRLPALLKV
SSEMNATNLL KRDIVHLNLK LSQLQALLDE KEAQLRQFRS MEGGSTGSSS NLREETARVS
KDSSELFPTG IPQVGQTEIS QDSVAGGLGN IRSELIGSTS GNDSTTFLSN DRMRNGRADN
ATLKDNNGEV FGEEDFAEVK VEYQETFLGH TGPISRCCFS ASGNNIASAS LDGTVRIWTY
DTSTPVSRNA TIYCGTEILS LDWECKSDRL LLIGTSDGCI KAWNVDAKRV VCDLNTTEAF
PSVLDIKCSP VEPIFVSAAA SGGAGSNYID NLGFASLTVW NMKTWKAMTV LPLGEDPPAI
TSLCFNHNGK ILAASAVDGM IHMFDMSAGL QITGWPAHDS SISSILFGPD ETSIFSLGSD
GKIFEWSLQN QGQILWSRDS SRFCYPFNDS KYCRHEMALD ANGRRLLVTS SSFRAPIYQV
HGHLSGWRTL PHGAPITAVD WHPTLPIFLT GSADNSVRVT SLS
//
