ID I1LL61_SOYBN Unreviewed; 523 AA.
AC I1LL61;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=RING-CH-type domain-containing protein {ECO:0000259|PROSITE:PS51292};
GN Name=100815566 {ECO:0000313|EnsemblPlants:KRH29926};
GN ORFNames=GLYMA_11G147100 {ECO:0000313|EMBL:KRH29926.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH29926};
RN [1] {ECO:0000313|EMBL:KRH29926.1, ECO:0000313|EnsemblPlants:KRH29926}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH29926};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH29926.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH29926}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH29926};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH29926.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH29926.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000844; KRH29926.1; -; Genomic_DNA.
DR RefSeq; XP_006591142.1; XM_006591079.2.
DR AlphaFoldDB; I1LL61; -.
DR PaxDb; 3847-GLYMA11G20650-1; -.
DR EnsemblPlants; KRH29926; KRH29926; GLYMA_11G147100.
DR GeneID; 100815566; -.
DR Gramene; KRH29926; KRH29926; GLYMA_11G147100.
DR KEGG; gmx:100815566; -.
DR eggNOG; KOG1609; Eukaryota.
DR HOGENOM; CLU_039981_1_0_1; -.
DR InParanoid; I1LL61; -.
DR OMA; IVECLRW; -.
DR OrthoDB; 663778at2759; -.
DR Proteomes; UP000008827; Chromosome 11.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd16495; RING_CH-C4HC3_MARCH; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46158; OS02G0165000 PROTEIN; 1.
DR PANTHER; PTHR46158:SF1; RING_U-BOX SUPERFAMILY PROTEIN; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 381..398
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 410..431
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 437..459
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 259..321
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
FT REGION 1..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 173..213
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 473..523
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 56..74
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 82..116
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 138..157
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 175..192
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 199..213
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 479..523
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 523 AA; 57549 MW; 5B698A7919897F88 CRC64;
MTSTEEKPVT VSEEHDASSC RRTVSLPVQK VDDPMAITEE TTHVPPRKRQ NLLLEIPSRT
EESSQEFVAI KMPPTPSSNP TPTPKRVNFL VSSRSVDPPT YHSPGPSTSR GKSSIRNLLP
KLSFRYRTPA DIEKPNTAAP EVSSTGTGEK PSISRSLSLT KIFTPRIKRA SSLPLDEIRQ
SNNESSQGGS VGGPLNKREA QRKIARSLSV PANDKDKSLR RMDSFFRVVP STPQVKEGNE
LLATHTTNDT ENEDANGEDI AEEEAVCRIC LVDLCEGGET FKLECSCKGE LALAHQECAI
KWFSIKGNKT CDVCKEEVRN LPVTLLRIQS IRNRNNGGNR TQLEDVNGYR VWQEVPVLVI
VSMLAYFCFL EQLLVGKMGT GAIAISLPFS CVLGLLSSMT SSTMVKSRFI WIYASVQFAL
VVLFAHIFYS VVHVQAVLSI LLATFAGFGV VMSGSSILVE YFRWRRRVQA LSEQRHGPQL
MPQAGQNPRT SNVQRPGPGS GSGLAPSNHS QPVVQNQQNS NQS
//
