ID I1LU77_SOYBN Unreviewed; 484 AA.
AC I1LU77;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 61.
DE RecName: Full=SET domain-containing protein {ECO:0000259|PROSITE:PS50280};
GN Name=100803651 {ECO:0000313|EnsemblPlants:KRH26824};
GN ORFNames=GLYMA_12G195700 {ECO:0000313|EMBL:KRH26824.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH26824};
RN [1] {ECO:0000313|EMBL:KRH26824.1, ECO:0000313|EnsemblPlants:KRH26824}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH26824};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH26824.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH26824}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH26824};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH26824.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH26824.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000845; KRH26824.1; -; Genomic_DNA.
DR RefSeq; XP_003540318.1; XM_003540270.3.
DR AlphaFoldDB; I1LU77; -.
DR STRING; 3847.I1LU77; -.
DR PaxDb; 3847-GLYMA12G32180-1; -.
DR EnsemblPlants; KRH26824; KRH26824; GLYMA_12G195700.
DR GeneID; 100803651; -.
DR Gramene; KRH26824; KRH26824; GLYMA_12G195700.
DR KEGG; gmx:100803651; -.
DR eggNOG; KOG2084; Eukaryota.
DR HOGENOM; CLU_034791_0_0_1; -.
DR InParanoid; I1LU77; -.
DR OMA; TYHSLLC; -.
DR OrthoDB; 56553at2759; -.
DR Proteomes; UP000008827; Chromosome 12.
DR ExpressionAtlas; I1LU77; baseline and differential.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008168; F:methyltransferase activity; IEA:InterPro.
DR CDD; cd20071; SET_SMYD; 1.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR InterPro; IPR044237; ATXR2-like.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR47436; HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2; 1.
DR PANTHER; PTHR47436:SF1; SET DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00856; SET; 1.
DR Pfam; PF01753; zf-MYND; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50280; SET; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 41..454
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT REGION 123..151
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 484 AA; 53914 MW; 284C6CB255A5F493 CRC64;
MDSICPIGLQ CATEISALLS PPSPLQVQKY YHDLLTARGC SGIKVKQDGN FGKGLYADMD
FKEGELVLKD PMLVGAQHPL NKIDCLVCSF CFCFIGSIEL QIGRRLYMQH LRANESHGCE
VGSSSKHCHE MDSSDEEEST QQCTSGSSKT KVPLPEGIVE SLMNGQLVLP FSEKFSLPPA
VPCPGGCGEA YYCSMSCAEA DWGSSHSLLC TGESSDSARR EALLKFIKHA NETNDIFLLA
AKAISSTMLM YRKLKAVSLE EQMKHNTSCV SNHCNLSILL EAWKPISMGH KRRWWDCIAL
PDDVDSSDEA SFRLQIKMLA FESLQLLKTA IFDKECEPLF SLEIYGNIIG MFELNNLDLV
VASPVEDYFL YIDDLTYPNK EEAEKITQPV LDALGEEYSI YCEGTAFFPL QSCLNHSCCP
NAKAFKREED KDGQATIIAQ RSICKGEEIT ISYVDEDLTF EERQASLADY GFRCRCSKCI
EEEP
//
