ID I1M2K6_SOYBN Unreviewed; 1250 AA.
AC I1M2K6;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 61.
DE RecName: Full=DNA polymerase V {ECO:0008006|Google:ProtNLM};
GN Name=100803141 {ECO:0000313|EnsemblPlants:KRH21707};
GN ORFNames=GLYMA_13G254600 {ECO:0000313|EMBL:KRH21707.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH21707};
RN [1] {ECO:0000313|EMBL:KRH21707.1, ECO:0000313|EnsemblPlants:KRH21707}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH21707};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH21707.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH21707}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH21707};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH21707.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH21707.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the MYBBP1A family.
CC {ECO:0000256|ARBA:ARBA00006809}.
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DR EMBL; CM000846; KRH21707.1; -; Genomic_DNA.
DR RefSeq; XP_003543126.1; XM_003543078.2.
DR AlphaFoldDB; I1M2K6; -.
DR STRING; 3847.I1M2K6; -.
DR PaxDb; 3847-GLYMA13G32760-1; -.
DR EnsemblPlants; KRH21707; KRH21707; GLYMA_13G254600.
DR GeneID; 100803141; -.
DR Gramene; KRH21707; KRH21707; GLYMA_13G254600.
DR KEGG; gmx:100803141; -.
DR eggNOG; KOG1926; Eukaryota.
DR HOGENOM; CLU_003261_0_0_1; -.
DR InParanoid; I1M2K6; -.
DR OMA; NSIYWIL; -.
DR OrthoDB; 1222663at2759; -.
DR Proteomes; UP000008827; Chromosome 13.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR007015; DNA_pol_V/MYBBP1A.
DR PANTHER; PTHR13213:SF2; MYB-BINDING PROTEIN 1A; 1.
DR PANTHER; PTHR13213; MYB-BINDING PROTEIN 1A FAMILY MEMBER; 1.
DR Pfam; PF04931; DNA_pol_phi; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT REGION 1..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 549..580
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 877..918
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 877..898
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 899..918
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1250 AA; 139668 MW; B62F9E1AD87C035B CRC64;
MGSSSKKRNS ASEEQTLAAD EYPKMLNKKQ KNTTTDDDSQ QQQPSVKPME RKKKRKALDK
GRRRTASQPD PKPVPPSTDS PSTSGGSAMP EFHIGVFKDL AAASKSAREA AAKQMVTELK
AVQNAYDSRE KESGEGGLKL EAEKDDGLDN CAPSVRYAVR RLIRGVSSSR ECARQGFALG
LTILAGTVHN INVASFLKLV VNLLEVTSSM KGQEAKDCLL GRLFAYGALA RSGRLIQEWN
MDKSTPYLRE FISVLISLAN KKRYLQEPAV SIILDLVEKL PVEALMNHVL EAPGLKEWFE
AAIEVGNPDA LFLALKVREK ISIDSSVFGK LLPNPFSSSQ LFSADHLSSL SNCLKESTFC
QPRVHSVWPV LINILLPNTI LQLEDAASAS NSLKKHKKSR KSSSSDEEIA KNLQSFCEII
IEGSLLISSH DRKHFAFDVL FLLLQKLPAS LVPVVLSNKV VQCLVDVLST KNTWLFKVAQ
HFLKQLSDWV GDDDVRRVAV IVAIQKHSNG KFDRITRSKL VKDFMSQFKT EPGCMLFIQN
LMNLFVDEGN APEEPSDQSQ TTDENSEIGS IEDKDSPRTN GNSDFLKSWV IESLPSILKF
LKLDHEEKFR VQKEIMKFLA VQGLFTASLG SEVTSFELQE KFRWPKSSAS NALCKMCIDQ
LQLLLANAQK GEGSRPLANR VEPNDLGSYF MKFFGTLCNI PSVSLFRSLD DVDQKAVKKL
QAMEARLSRE ERSHDCSTDA NRLHALRYLL IQLLLQVLLR PGEFSEAASE LIICCKKAFS
TSDLPESSGE DDVEVDDAPE LMDVLVDTLL SLLPQSSAAM RSSIEQVFKY FCGDITDDGL
MRMLRVIKKN LKPARHPDAA SADDDDEDDD FINIEEEIDQ AETGESDGQT DDSESVVEVE
ETDHGHSEAS DDSDSGMDDD AMFRIDTYLA QMFKEKKNQA GGETAHSQLV LFKLRILSLL
EIFLHENPGK PQVLMVYSNL AQAFVNPHTA EVSEQLGQRI WGILQKQIFK AKDYPRGDGV
QLSTLESLLE KNLKLASKPF KRQKSASNPS KQSAAWNRQK MICSLAQTAT FWILKIIDSR
NFAESELERI AQIFGEVLVG YFDNKKSQIK SGFLKEIIRR RPWVGHAILG FILERCGSAK
SDFRRVEALE LVMEILKSLT SGNNDEQNAS KKILKNSFDK LSRLMKELVT NMPSKPARRT
EVLKFCVKAL EILSKHNLTK NFVKTLAPDT QAALEVQLGE QFISLKKLEK
//
