ID I1M6I0_SOYBN Unreviewed; 776 AA.
AC I1M6I0;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=GLYMA_14G014900 {ECO:0000313|EMBL:KRH14251.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH14251};
RN [1] {ECO:0000313|EMBL:KRH14251.1, ECO:0000313|EnsemblPlants:KRH14251}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH14251};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH14251.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH14251}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH14251};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH14251.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH14251.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000847; KRH14251.1; -; Genomic_DNA.
DR AlphaFoldDB; I1M6I0; -.
DR SMR; I1M6I0; -.
DR PaxDb; 3847-GLYMA14G01860-1; -.
DR EnsemblPlants; KRH14251; KRH14251; GLYMA_14G014900.
DR Gramene; KRH14251; KRH14251; GLYMA_14G014900.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_4_1; -.
DR InParanoid; I1M6I0; -.
DR OMA; CYNTMIE; -.
DR Proteomes; UP000008827; Chromosome 14.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 13.
DR PANTHER; PTHR47941:SF22; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, MITOCHONDRIAL-RELATED; 1.
DR PANTHER; PTHR47941; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 6.
DR Pfam; PF13812; PPR_3; 1.
DR SUPFAM; SSF81901; HCP-like; 2.
DR PROSITE; PS51375; PPR; 15.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 82..116
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 212..246
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 247..281
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 282..316
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 317..347
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 351..385
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 398..432
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 433..467
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 468..502
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 503..537
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 538..572
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 573..607
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 608..642
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 666..700
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 701..735
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 776 AA; 87826 MW; EBB67002B22D193E CRC64;
MDDASHSQDN AFKSEGMRKT VHDVCRVLDT YPWGPALEDA FNTFDEMPQP ELVVGVIWRL
NDVRVALHYF RWVERKTEQP HCPEAYNALL MLMARTRNLE YLEQILEEMS MAGFGPSNNT
CIEMVASFVK LRKLGEAFGV IETMRKFKLR PAYSAYTTLI GSLSAAHEAD PMLTLLRQMQ
EIGYEVSVHL FTMLIRVFAR EGRMKSNSFN ADLVLYNVCI DCFGKVGKVD MAWKFFHELK
SQESVPDDVT YTSMIGVLCK AERVDEAVEM LEELDSNRSV PCVYAYNTMI MGYGSVGKFD
EAYSLLERQK RKGCIPSVIA YNCILTCLGR KGKVEEALRT LEEMKIDAVP NLSSYNILID
MLCKAGELEA ALKVQDSMKE AGLFPNIMTM LDSGQTPNAV VYTSLIRNFF KCGRKEDGHK
IYKEMMHRGC SPDLMLLNNY MDCVFKAGEI EKGRALFEEI KAQGLIPDVR SYSILVHGLG
KAGFSKETYK LFYEMKEQGL HLDTCAYNIV IDRFCKSGKV NKAYQLLEEM KTKGLQPTVV
TYGSVIDGLA KIDRLDEAYM LFEEANSKGV DLNVVVYSSL IDGFGKVGRI DEAYLILEEL
MQKGLTPNTY TWNCLLDALV KAEEIDEALV CFQNMKNLKC PPNEVRKFNK AFVFWQEMQK
QGLKPNTITH TTMISGLARA GNVLEAKDLF ERFKSSWGIP DSMCYNAMIE GLNNANKAMD
AYILFEETRL KGCHIYSETC VVFLDALHKA DCLEQAAIVG AVLREMAKSQ HATRLT
//
