ID I1MIJ4_SOYBN Unreviewed; 259 AA.
AC I1MIJ4;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 24-JAN-2024, entry version 66.
DE RecName: Full=PCI domain-containing protein {ECO:0000259|PROSITE:PS50250};
GN Name=100817593 {ECO:0000313|EnsemblPlants:KRH13242};
GN ORFNames=GLYMA_15G224900 {ECO:0000313|EMBL:KRH13242.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH13242.1};
RN [1] {ECO:0000313|EMBL:KRH13242.1, ECO:0000313|EnsemblPlants:KRH13242}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH13242};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH13242.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH13242}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH13242};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH13242.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH13242.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the CSN7/EIF3M family. CSN7 subfamily.
CC {ECO:0000256|ARBA:ARBA00008482}.
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DR EMBL; CM000848; KRH13242.1; -; Genomic_DNA.
DR RefSeq; XP_003546686.1; XM_003546638.3.
DR AlphaFoldDB; I1MIJ4; -.
DR SMR; I1MIJ4; -.
DR STRING; 3847.I1MIJ4; -.
DR PaxDb; 3847-GLYMA15G35760-1; -.
DR EnsemblPlants; KRH13242; KRH13242; GLYMA_15G224900.
DR GeneID; 100817593; -.
DR Gramene; KRH13242; KRH13242; GLYMA_15G224900.
DR KEGG; gmx:100817593; -.
DR eggNOG; KOG3250; Eukaryota.
DR HOGENOM; CLU_054426_2_1_1; -.
DR InParanoid; I1MIJ4; -.
DR OrthoDB; 931897at2759; -.
DR Proteomes; UP000008827; Chromosome 15.
DR ExpressionAtlas; I1MIJ4; baseline and differential.
DR GO; GO:0008180; C:COP9 signalosome; IBA:GO_Central.
DR InterPro; IPR045237; COPS7/eIF3m.
DR InterPro; IPR000717; PCI_dom.
DR PANTHER; PTHR15350:SF5; COP9 SIGNALOSOME COMPLEX SUBUNIT 7; 1.
DR PANTHER; PTHR15350; COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17; 1.
DR Pfam; PF01399; PCI; 1.
DR SMART; SM00088; PINT; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 1..160
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
FT REGION 239..259
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 239..253
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 259 AA; 29663 MW; 6FDBE04F51BE0C14 CRC64;
MDIEQKQSEL IDHFVKRASA ASDAAALASV LVEATSHPSL FAFSEILALP NLLQLEATEN
SAYLDMLRLF AHGTWSDYKS NADRLPQLIS DQILKLKQLT VLTLAETYKV LPYDQLMQEL
DVTNVRELED FLINECMYAG IVRGKLDQLR RCFEVQFAAG RDLRPDQLGN MIQTLSSWLT
TSENLLVSIQ EKIKWADAMS EIDKKHRKEV EEKVEEVKKS IFKADIDFRG HEEICSESGG
VMDYEEDRSR PKRRRHPIS
//
