ID I1ML99_SOYBN Unreviewed; 664 AA.
AC I1ML99;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 64.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=GLYMA_16G048700 {ECO:0000313|EMBL:KRH06831.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH06831.1};
RN [1] {ECO:0000313|EMBL:KRH06831.1, ECO:0000313|EnsemblPlants:KRH06831}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH06831};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH06831.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH06831}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH06831};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH06831.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH06831.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000849; KRH06831.1; -; Genomic_DNA.
DR AlphaFoldDB; I1ML99; -.
DR EnsemblPlants; KRH06831; KRH06831; GLYMA_16G048700.
DR Gramene; KRH06831; KRH06831; GLYMA_16G048700.
DR eggNOG; KOG2164; Eukaryota.
DR HOGENOM; CLU_011811_1_0_1; -.
DR Proteomes; UP000008827; Chromosome 16.
DR ExpressionAtlas; I1ML99; baseline.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd16536; RING-HC_RNF10; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR039739; MAG2/RNF10.
DR InterPro; IPR018957; Znf_C3HC4_RING-type.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR12983; RING FINGER 10 FAMILY MEMBER; 1.
DR PANTHER; PTHR12983:SF9; RING FINGER PROTEIN 10; 1.
DR Pfam; PF00097; zf-C3HC4; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 141..187
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 66..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 595..664
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 595..642
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 664 AA; 74414 MW; C939B4003BE338BC CRC64;
MVSPQQNSRT GSRSHGGRRT GMGTGTASYH RNQQTPGSVH SHGSAPSAGR KAQTVNGNYL
LNFQYDPISR SQPRGPPPPP TTTRRHRKRK PYNKDLFLQA NYKFMVLGLG NYSPESMDPD
KMLQWEDIIC VTYLTPFSVQ CPICLEYPMC PQITTCGHIF CFPCILQYLL MGEEDHKGDS
WKRCPLCFVM ISAKDLYTLH ITNVKQYQVG DNVEFTFLTR KKDSFTLSLK NKRETNTTSG
VDGDICDPFS KFTLISDVDL SVKHAISDLD GWLARADSGL VDDLEKLPYV CAAMQQLEQR
KRYWSEHRSH DSEKSSMIID CGHQIPSTVA NSMDTDDENC SNGSITSSSD FLDQNKVMML
DKSTAGACSD QNLDVEKELI EQEMNLSSSY EEKNDNQRHS EGVIGDVKEN SSYSFYQAAD
GQHLILHPLN MKCLLHHYGS YDMLPHRISG RILQLETVTQ TEAIRRRYRF LSHFPLTTTF
QLCEVDLSEM LPPEALAPFI DEIKKRANQR KQLAKKEKKE KIKAEATAAY SLPISLSHQF
TSRDDPPTFS MDDFEALGNS TISSSPPLAG ERKSFSNVTR LGFAAAHDSP SLQIQETSGL
HNNNRTSDSS VSTGLRNGET QSYSNVISRA ESNISSNAPK TNELGKKGKK PNRVLLSTAG
GRRY
//
