ID I1N2N9_SOYBN Unreviewed; 573 AA.
AC I1N2N9;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 27-MAR-2024, entry version 70.
DE RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN Name=100790713 {ECO:0000313|EnsemblPlants:KRH00065};
GN ORFNames=GLYMA_18G189700 {ECO:0000313|EMBL:KRH00065.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRH00065};
RN [1] {ECO:0000313|EMBL:KRH00065.1, ECO:0000313|EnsemblPlants:KRH00065}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH00065};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH00065.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH00065}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH00065};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH00065.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH00065.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108}.
CC -!- SIMILARITY: Belongs to the TALE/BELL homeobox family.
CC {ECO:0000256|ARBA:ARBA00006454}.
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DR EMBL; CM000851; KRH00065.1; -; Genomic_DNA.
DR RefSeq; XP_003551512.1; XM_003551464.3.
DR AlphaFoldDB; I1N2N9; -.
DR SMR; I1N2N9; -.
DR STRING; 3847.I1N2N9; -.
DR PaxDb; 3847-GLYMA18G41280-1; -.
DR EnsemblPlants; KRH00065; KRH00065; GLYMA_18G189700.
DR GeneID; 100790713; -.
DR Gramene; KRH00065; KRH00065; GLYMA_18G189700.
DR KEGG; gmx:100790713; -.
DR eggNOG; KOG0773; Eukaryota.
DR HOGENOM; CLU_011058_3_1_1; -.
DR InParanoid; I1N2N9; -.
DR OMA; CNVGRGI; -.
DR OrthoDB; 468484at2759; -.
DR Proteomes; UP000008827; Chromosome 18.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR008422; Homeobox_KN_domain.
DR InterPro; IPR006563; POX_dom.
DR PANTHER; PTHR11850:SF338; BEL1-LIKE HOMEODOMAIN PROTEIN; 1.
DR PANTHER; PTHR11850; HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; 1.
DR Pfam; PF05920; Homeobox_KN; 1.
DR Pfam; PF07526; POX; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00574; POX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 353..416
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 355..417
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 327..355
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 425..467
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 425..447
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 448..463
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 573 AA; 64275 MW; BEB5A15991418BFD CRC64;
MAEEGFEHYH VPQQSRRNKL RVFPEHQPYC FVESSSTCPT LASLYDPSLI IPSDLLACAT
QQGGGGAAAK EQEGSNLMMG FVKGAVVNGD AIQVIINNNN PLYQLQNLRE YGDTYNDGSE
MMVFKPEPLS LSLSSHSNST HHYPLELNLQ RYGAVNPGLV GGNSEVSRNS VPLGPFTGYA
SILKGSRFLK PAQQLLEELC DVGVRGIYTT EKIIAPDASL MEPPREGFSA SEVVGGDDPL
GEYQNYGRMK KCRLLTMLDE VHRRYRQYYQ QMHAVITSFE YVAGLGNVAP YASLAINAMS
KPFRCLKNAI TDQLQFINKA PFQISNRKDE SPRFHSSDRG THSQRPGFLE HQQPVWRPQR
GLPERAVSVL RAWLFEHFLH PYPTDTDKLM LAKQTGLSRN QVSNWFINAR VRLWKPMVEE
IHMLESQQGQ KRSHWEERSK KNLSDHLPSD HNSVVTENPS TSMEKFHDAP YKHPRNELAN
KQVRSQEQLN QTNTGNQQVM GVGVSNNGVS LTLGLHQNHH GIGLFEPFGM SAAQRFGVAL
QPEGYVLSSF ESQNRHFGRD VIGGGQLLHD FAC
//
