ID I1N651_SOYBN Unreviewed; 1242 AA.
AC I1N651;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 2.
DT 24-JAN-2024, entry version 67.
DE RecName: Full=Structural maintenance of chromosomes protein {ECO:0000256|PIRNR:PIRNR005719};
GN Name=100781330 {ECO:0000313|EnsemblPlants:KRG93535};
GN ORFNames=GLYMA_19G022800 {ECO:0000313|EMBL:KRG93535.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRG93535};
RN [1] {ECO:0000313|EMBL:KRG93535.1, ECO:0000313|EnsemblPlants:KRG93535}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG93535};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG93535.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG93535}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG93535};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG93535.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG93535.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR005719}.
CC -!- SIMILARITY: Belongs to the SMC family. SMC4 subfamily.
CC {ECO:0000256|ARBA:ARBA00006005}.
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DR EMBL; CM000852; KRG93535.1; -; Genomic_DNA.
DR RefSeq; XP_003554891.1; XM_003554843.3.
DR AlphaFoldDB; I1N651; -.
DR SMR; I1N651; -.
DR STRING; 3847.I1N651; -.
DR PaxDb; 3847-GLYMA19G02680-1; -.
DR EnsemblPlants; KRG93535; KRG93535; GLYMA_19G022800.
DR GeneID; 100781330; -.
DR Gramene; KRG93535; KRG93535; GLYMA_19G022800.
DR KEGG; gmx:100781330; -.
DR eggNOG; KOG0996; Eukaryota.
DR HOGENOM; CLU_001042_4_1_1; -.
DR InParanoid; I1N651; -.
DR OMA; SEKNQNA; -.
DR OrthoDB; 231904at2759; -.
DR Proteomes; UP000008827; Chromosome 19.
DR ExpressionAtlas; I1N651; baseline and differential.
DR GO; GO:0005694; C:chromosome; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0051276; P:chromosome organization; IEA:InterPro.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR Gene3D; 1.10.287.1490; -; 2.
DR Gene3D; 1.20.1060.20; -; 1.
DR Gene3D; 3.30.70.1620; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003395; RecF/RecN/SMC_N.
DR InterPro; IPR024704; SMC.
DR InterPro; IPR010935; SMC_hinge.
DR InterPro; IPR036277; SMC_hinge_sf.
DR PANTHER; PTHR18937:SF172; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN; 1.
DR PANTHER; PTHR18937; STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; 1.
DR Pfam; PF06470; SMC_hinge; 1.
DR Pfam; PF02463; SMC_N; 1.
DR PIRSF; PIRSF005719; SMC; 1.
DR SMART; SM00968; SMC_hinge; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF75553; Smc hinge domain; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Nucleus {ECO:0000256|PIRNR:PIRNR005719};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 554..670
FT /note="SMC hinge"
FT /evidence="ECO:0000259|SMART:SM00968"
FT COILED 229..372
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 720..841
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 878..1014
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1046..1083
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1242 AA; 141379 MW; DBF81252513C6B6B CRC64;
MDSHAESAPD SATRHRSSAR PRLFIKEMVM RNFKSYAGEQ RVGPFHKSFS AVVGPNGSGK
SNVIDAMLFV FGKRAKQMRL NKVSELIHNS TNHQNLDSAG VSVHFQEIVD SDDGTYEAVP
GSDFVITRVA FRDNSSKYYI NNHTSNFTEV TKKLKGKGVD LDNNRFLILQ GEVEQISLMK
PKAQGPHDEG FLEYLEDIIG TNKYVEKIDE SHKLLESLNE KRSGVVQMVK LSEKERDSLE
DVKNEAEAYM LKELSLLKWQ EKATKFALDD TGGKMDELQG NVVTLEENLK AERDKIQDSK
QTLKELETTH NNYMKRQEEL DNDMRKCKEE FKEFERQDVK YREDFKHVNQ KIKKLEDKVE
KDSSKIEAFI KEGEESTDLI PKLEDNIPKL QKLLLDEEKA LEEITESSKV ETEKYRSELS
KVRTELEPWE KDLIEHNGKL EVACTEAKLL NEKHEGASQA FKDAQKKMKS ISETIKSKTA
SISQIKSNIE KCKHEASEAH QIEEECIKEQ DELIPLEQSA RQKVAELKSV LDSEKSQGSV
LKAILKAKET KQIEGIYGRM GDLGAIDAKY DVAISTACHG LDYIVVETTN AAQACVELLR
RENLGVATFM ILEKQVDLLP KLKKNVNTPE GVPRLFDLVK VQDERMKLAF FAALRNTVVA
KDLDQATRIA YGGNTEFRRV VTLDGALFEN SGTMSGGGSK PRGGKMGTSI RATSMSAESV
ANAEKELSRL TNKLNDFRQR IMAAVQHYQA SEKAVAALEM ELAKSQKEVD SLKSQYNYIE
KQLDSLEAAS MPQEDELDRM KELKKIVSAE EREINRLTNG SKQLKEKALE LQRNLENVGG
EKLKSQKSKV QKIQSDIDKH SSGINRCKVQ IETGQKMVKK LTKGIEDSKK EKDRLTEQKE
KLTQAFKEIE QKAFVVQENY KKTQELIDKH TIVLEKAKSD YNKMKKVMDE LRASEVDVDF
KLKDMKKAYK ELEMKRKGYK KRLDDLQTAL RKHLEQIQAD LVDQEKLQAT LDDEHLNAAC
DLKKACEMVA LLEAQLKEMN PNLDSISEYR KKVSSYNERV EELNAVTQER DDIKKQYDEW
RKKRLDEFME GFNAISLKLK EMYQMITLGG DAELELVDSL DPFSEGVVFS VRPPKKSWKN
IANLSGGEKT LSSLALVFAL HHYKPTPLYV MDEIDAALDF KNVSIVGHYV KDRTKDAQFI
IISLRNNMFE LADRLVGIYK TDNCTKSITI NPGSFVICEK AA
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