ID I1NEL9_SOYBN Unreviewed; 260 AA.
AC I1NEL9;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 71.
DE RecName: Full=MYB transcription factor {ECO:0008006|Google:ProtNLM};
GN ORFNames=GLYMA_20G082300 {ECO:0000313|EMBL:KRG90311.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRG90311.1};
RN [1] {ECO:0000313|EMBL:KRG90311.1, ECO:0000313|EnsemblPlants:KRG90311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG90311};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG90311.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG90311}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG90311};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG90311.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG90311.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000853; KRG90311.1; -; Genomic_DNA.
DR AlphaFoldDB; I1NEL9; -.
DR SMR; I1NEL9; -.
DR STRING; 3847.I1NEL9; -.
DR PaxDb; 3847-GLYMA20G20980-1; -.
DR EnsemblPlants; KRG90311; KRG90311; GLYMA_20G082300.
DR Gramene; KRG90311; KRG90311; GLYMA_20G082300.
DR eggNOG; KOG0048; Eukaryota.
DR HOGENOM; CLU_028567_25_2_1; -.
DR InParanoid; I1NEL9; -.
DR OMA; EDNSHKA; -.
DR OrthoDB; 404723at2759; -.
DR Proteomes; UP000008827; Chromosome 20.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd00167; SANT; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR044676; EOBI/EOBII-like_plant.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR45675:SF133; MYB DOMAIN PROTEIN 79; 1.
DR PANTHER; PTHR45675; MYB TRANSCRIPTION FACTOR-RELATED-RELATED; 1.
DR Pfam; PF00249; Myb_DNA-binding; 2.
DR SMART; SM00717; SANT; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51294; HTH_MYB; 2.
DR PROSITE; PS50090; MYB_LIKE; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 22..74
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 22..70
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 71..121
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 75..125
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT COILED 136..163
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 260 AA; 30159 MW; 3EF8ECB146883C37 CRC64;
MYWGEVMAGH MGRGVIEEQV WRKGPWTAEE DRLLVEYVRL HGEGRWNSVA RLAGLKRNGK
SCRLRWVNYL RPDLKRGQIT SQEESIILEL HTRWGNRWST IARSLPGRTD NEIKNYWRTH
FKKKAKRPSD AVEKARNRLL RKQQFHQQQQ QQLQQQKAQQ QLQFNFDVKG IMAFLEDNSH
KAPYISQSRL VVNMHQNTTE EQGYLYSMPN GNCSASSALE TSAEEVLWDG LWNIDDVHGN
FSVASAASKV GLYNLVAPFC
//
