ID I1NNP6_ORYGL Unreviewed; 645 AA.
AC I1NNP6;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 48.
DE RecName: Full=BAH domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA01G0148600.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA01G0148600.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; I1NNP6; -.
DR STRING; 4538.I1NNP6; -.
DR EnsemblPlants; ORGLA01G0148600.1; ORGLA01G0148600.1; ORGLA01G0148600.
DR Gramene; ORGLA01G0148600.1; ORGLA01G0148600.1; ORGLA01G0148600.
DR eggNOG; KOG1886; Eukaryota.
DR HOGENOM; CLU_026265_2_0_1; -.
DR OMA; TIDGPNS; -.
DR Proteomes; UP000007306; Unassembled WGS sequence.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0001217; F:DNA-binding transcription repressor activity; IEA:EnsemblPlants.
DR GO; GO:0061628; F:H3K27me3 modified histone binding; IEA:EnsemblPlants.
DR GO; GO:0140566; F:histone reader activity; IEA:EnsemblPlants.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0045814; P:negative regulation of gene expression, epigenetic; IEA:EnsemblPlants.
DR GO; GO:0034244; P:negative regulation of transcription elongation by RNA polymerase II; IEA:EnsemblPlants.
DR GO; GO:2000028; P:regulation of photoperiodism, flowering; IEA:EnsemblPlants.
DR CDD; cd04713; BAH_plant_3; 1.
DR Gene3D; 2.30.30.490; -; 1.
DR Gene3D; 1.10.472.30; Transcription elongation factor S-II, central domain; 1.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR003618; TFIIS_cen_dom.
DR InterPro; IPR036575; TFIIS_cen_dom_sf.
DR PANTHER; PTHR46871; BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46871:SF1; BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01426; BAH; 1.
DR Pfam; PF07500; TFIIS_M; 1.
DR SMART; SM00439; BAH; 1.
DR SMART; SM00510; TFS2M; 1.
DR SUPFAM; SSF46942; Elongation factor TFIIS domain 2; 1.
DR PROSITE; PS51038; BAH; 1.
DR PROSITE; PS51321; TFIIS_CENTRAL; 1.
PE 4: Predicted;
FT DOMAIN 166..284
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 383..525
FT /note="TFIIS central"
FT /evidence="ECO:0000259|PROSITE:PS51321"
FT REGION 1..155
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 311..338
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 401..429
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 594..645
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 26..41
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 56..81
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 113..130
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 411..426
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 594..608
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 625..639
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 645 AA; 72393 MW; E40863236F956FBF CRC64;
MGRRRRFAQL ATTSDDDDDD APAADAPPKA KPPPPPSSSS GPKKPKQRRL ASAAADDDDD
VEEDDLELEE EEEDEKDLEE MRRNEEEERR EETQTRRRRR RRGRKPKRPA EESEEEEEEE
EEEEAKAEEA REEENTEAVP IGEPVKITGR GKKQRKHYTS FEYEGNTFEL EDPVLLTPED
SKEKPYVAIL KDITETEGSL SVTGQWFYRP EEADKKGGGS WKASDTRELF YSFHIDDVPA
ESVMHKCVVH FIPQHKKIPS RKEHPGFIVQ KVYDTVAKKL WNLTDKDYED NKQHEIDLLV
KKTIDRIGQL SDIEPADAPG DNNDQLSNKR GLRKRPVLPI DVSRDDALAG KSEQFGKAET
PGSDKLKNYA TLVKYKAVTG DQYRDRWLDK LVDTIPLTSK ESAGASHADP GGATKSSTNG
SSAKEDNEKS YSPDVIVSIM ASLERSTYEA LGSDFQKYNQ KLRQLLFNIK NSPVLRNRLM
NKELDPPVLL TMSPDELKVG LTAAERTSEP EESRKLQMTD ARCVRCAEKE VGVSDIIHAG
HGDRYQLECN ACGHSWFSSR DAITTLTVDT PTSAGGSVGT APWATAKFDV MEKQLTSPRD
HQPDKPLADA LHKSAAPYMP TLEKQKSFGK HKPDEPSSAP AAGHE
//
