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Database: UniProt
Entry: I1NRZ0_ORYGL
LinkDB: I1NRZ0_ORYGL
Original site: I1NRZ0_ORYGL 
ID   I1NRZ0_ORYGL            Unreviewed;      1227 AA.
AC   I1NRZ0;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 56.
DE   RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE            EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
OS   Oryza glaberrima (African rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA01G0263000.1, ECO:0000313|Proteomes:UP000007306};
RN   [1] {ECO:0000313|Proteomes:UP000007306}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA   Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA   Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA   Zuccolo A.;
RT   "The complete genome of Oryza glaberrima.";
RL   Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:ORGLA01G0263000.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC         Evidence={ECO:0000256|ARBA:ARBA00001556};
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DR   AlphaFoldDB; I1NRZ0; -.
DR   STRING; 4538.I1NRZ0; -.
DR   EnsemblPlants; ORGLA01G0263000.1; ORGLA01G0263000.1; ORGLA01G0263000.
DR   Gramene; ORGLA01G0263000.1; ORGLA01G0263000.1; ORGLA01G0263000.
DR   eggNOG; KOG0920; Eukaryota.
DR   HOGENOM; CLU_001832_1_6_1; -.
DR   OMA; HMECGSA; -.
DR   Proteomes; UP000007306; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR   CDD; cd17917; DEXHc_RHA-like; 1.
DR   CDD; cd06007; R3H_DEXH_helicase; 1.
DR   CDD; cd18791; SF2_C_RHA; 1.
DR   Gene3D; 1.20.120.1080; -; 1.
DR   Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   Gene3D; 3.30.1370.50; R3H-like domain; 1.
DR   InterPro; IPR002110; Ankyrin_rpt.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR048333; HA2_WH.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR034083; R3H_DEXH_helicase.
DR   InterPro; IPR001374; R3H_dom.
DR   InterPro; IPR036867; R3H_dom_sf.
DR   PANTHER; PTHR18934:SF213; 3'-5' RNA HELICASE YTHDC2; 1.
DR   PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF21010; HA2_C; 1.
DR   Pfam; PF04408; HA2_N; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   Pfam; PF01424; R3H; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00393; R3H; 1.
DR   SUPFAM; SSF48403; Ankyrin repeat; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   SUPFAM; SSF82708; R3H domain; 1.
DR   PROSITE; PS50088; ANK_REPEAT; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51061; R3H; 1.
PE   4: Predicted;
KW   ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW   ProRule:PRU00023}; ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT   DOMAIN          49..112
FT                   /note="R3H"
FT                   /evidence="ECO:0000259|PROSITE:PS51061"
FT   DOMAIN          220..400
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   REPEAT          483..515
FT                   /note="ANK"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT   DOMAIN          570..744
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          1..45
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1021..1049
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1129..1148
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1172..1227
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1021..1037
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1129..1146
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1184..1227
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1227 AA;  134955 MW;  ABD7F24202E14BDD CRC64;
     MVRRGRKGKD AAAGAGGTGG RGGGAGRGGG RGGSGGGGGG GGGGGGVREA TLVRVSKVLE
     DFQASDAQVY KFEPGISKQE RAAIHEMCRK MGMISKSSGN GERRCLSVYK RKQNQGLETE
     EGPSHLGFSV EARNVLQDLF MHYPPDDAEL NGHTVRNSSD KAVKIQWKPD GAFCRPALRK
     QDILKKVEML ASKVNKSEQL RKIVQDRSKL PISSYKDAIS STLENHQVVL ISGETGCGKT
     TQVPQYILDH MWGKGESCKI VCTQPRRISA ISVAERISAE RGESVGDTVG YKIRLESKGG
     KNSSIMFCTN GVLLRLLIGR VTNISKEQNQ KRSFDDAVTG ITHIIVDEIH ERDRFSDFML
     AILRDLLPLY PHLRLVLMSA TIDAERFSNY FSGCPFIQVP GFTHPVKTFY LEDVLSILQS
     VGDNHLDPTT DDLKQSSLLT DDYKSSMDEA INLALDNDEF DPLLELISGE QNQEIFNYQH
     SETGVTPLMV LAGKGQVGDI CMLLSFGVDC STRDHDGKSA LDWAEQGNQQ EVCEVIKKHM
     ECGSAKLTEE NELLNKYLAT INPEHIDTVL IERLLRKICV DSNEGAILVF LPGWEDINQT
     RERLLASPFF QDSSKFLVLS LHSMIPSSEQ KKVFKRPPAG SRKIILSTNI AETAVTIDDV
     VFVIDSGRMK EKSYDPYNNV STLHSSWVSK ANARQRQGRA GRCQPGTCYH LYSRFRAASL
     LEYQIPEIKR MPIEELCLQV KLLDPNCRIA DFLRKTLDPP VPETVRNAIT VLQDLGALTQ
     DEQLTELGEK LGSLPVHPST SKMLLFGILM NCLDPALTLA CAADYRDPFL LPMAPDERKR
     AAAAKVELAS LYGGYSDQLA VVAAMDCWRR AKDRGQEAQF CSKYFVSSNT MNMLSNMRKQ
     LQNELAQRGF VPVDASACSL NARDPGIIRA VLMAGAYPMV GRLLPPRKNT RRAVIETASG
     AKVRLHPHSC NFNLSFRKTS GNPLVIYDEI TRGDGGMYIK NSSVVGSYPL IILATEMVVA
     PPEDDDSDEE DGDSSEDETE KVTLGQHKEI MSSPDNSVSV VIDRWLRFDA TALDVAQIYC
     LRERLASAIL FKVKHPQDVL PPDLGATMYA IACILSYDGL PAMITSDDVA TSQGSNQSSA
     ESSRFSQGRR VGYIPPGGFL MSLLSDKPLN APHFQKSFNH PDGASGHIRS SRTSVGRFDQ
     SRHPQRNNSG PGSSAARTFK RQRNGAQ
//
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