ID I1NWE7_ORYGL Unreviewed; 2177 AA.
AC I1NWE7;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA02G0005300.1};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA02G0005300.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA02G0005300.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR STRING; 4538.I1NWE7; -.
DR EnsemblPlants; ORGLA02G0005300.1; ORGLA02G0005300.1; ORGLA02G0005300.
DR Gramene; ORGLA02G0005300.1; ORGLA02G0005300.1; ORGLA02G0005300.
DR eggNOG; KOG0951; Eukaryota.
DR HOGENOM; CLU_000335_1_0_1; -.
DR OMA; QTEIQYY; -.
DR Proteomes; UP000007306; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProt.
DR CDD; cd18019; DEXHc_Brr2_1; 1.
DR CDD; cd18021; DEXHc_Brr2_2; 1.
DR CDD; cd18795; SF2_C_Ski2; 2.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 2.
DR Gene3D; 2.60.40.150; C2 domain; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 4.
DR Gene3D; 1.10.3380.10; Sec63 N-terminal domain-like domain; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR041094; Brr2_helicase_PWI.
DR InterPro; IPR048863; BRR2_plug.
DR InterPro; IPR035892; C2_domain_sf.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR004179; Sec63-dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR47961; DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED; 1.
DR PANTHER; PTHR47961:SF4; U5 SMALL NUCLEAR RIBONUCLEOPROTEIN HELICASE; 1.
DR Pfam; PF21188; BRR2_plug; 1.
DR Pfam; PF00270; DEAD; 2.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF18149; Helicase_PWI; 1.
DR Pfam; PF02889; Sec63; 2.
DR PIRSF; PIRSF039073; BRR2; 1.
DR SMART; SM00382; AAA; 2.
DR SMART; SM00487; DEXDc; 2.
DR SMART; SM00490; HELICc; 2.
DR SMART; SM00973; Sec63; 2.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 4.
DR SUPFAM; SSF158702; Sec63 N-terminal domain-like; 2.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 2.
DR PROSITE; PS51194; HELICASE_CTER; 2.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242}.
FT DOMAIN 527..709
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 734..940
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 1371..1548
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1585..1777
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 24..100
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 227..269
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 385..412
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 62..100
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 227..255
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2177 AA; 246608 MW; 4437EB104FCC665B CRC64;
MANLGGGAEA HARFKQYEYR ANSSLVLTTD SRPRDTHEPT GEPETLWGRI DPRSFGDRAV
QAKPPELEEK LTKSRKKKAA AADPDDLHRH DAKRRRRAAA AQREVSVLSL TDDVVYKPQT
KETRAAYEAL LSVIQQQFGG QPLDVLGGAA DEVLAVLKND KIKSPDKKKE IEKLLNPISN
QMFDQIVSIG KLITDFHDAS AGDSAAAPSG DGMDTALDDD IGVAVEFEEN EDDEESDFDQ
VQDDLDEDED DDLPESNAPG AMQMGGELDD DDMQNSNEGL TINVQDIDAY WLQRKVSQAY
EDIDPQHSQK LAEEILKIIA EGDDRDVENR LVMLLDYEKF DLIKLLLRNR LKIVWCTRLA
RAEDQEQRKK IEEDMMGNPT LTPILEQLHA TRASAKERQK NLEKSIRDEA KRLTKSENTG
IDGARDRRAV DRDMESGWLK GQRQLLDLDS LSFHQGGLLM ANKKCELPPG SFRTPHKGYE
EVHVPALKAK PYETGEKIVK ISDMPEWAQP AFAKMTQLNR VQSKVYETAL FKPDNILLCA
PTGAGKTNVA VLTILQQIGL HMKDGVFDNT KYKIVYVAPM KALVAEVVGN LSARLSAYGI
TVRELSGDQN LTKQQIDETQ IIVTTPEKWD IVTRKSGDRT YTQMVKLLII DEIHLLHDNR
GPVLESIVSR TVRQIETTKE HIRLVGLSAT LPNYEDVAVF LRVRSDGLFH FDNSYRPCPL
AQQYIGITVR KPLQRFQLMN EICYEKVMAS AGKHQVLIFV HSRKETAKTA RAIRDTALAN
DTLNRFLKDD SASQEILGSQ AELVKSSDLK DLLPYGFAIH HAGLARVDRE LVEELFADKH
IQVLVSTATL AWGVNLPAHT VIIKGTQIYN PEKGAWTELS PLDVMQMLGR AGRPQYDTHG
EGIILTGHSE LQYYLSLMNQ QLPIESQFIS RLADQLNAEI VLGTIQNARE ACSWLGYTYL
YIRMLRNPTL YGLPADIMET DKTLDERRAD LVHSAANLLD RNNLIKYDRK TGYFQVTDLG
RIASYYYISH GTISTYNEYL KPTMGDIELC RLFSLSEEFK YVSVRQDEKM ELAKLLDRVP
IPVKESLEEP SAKINVLLQA YISRLKLEGL SLSSDMVYIR QSAGRLLRAL FEIVLKRGWA
QLAEKALNLC KMIDKQMWNV QTPLRQFPGI PKEILMKLEK KELAWERYYD LSSQEIGELI
RFPKMGRQLH KCIHQLPKLN LSAHVQPITR TVLGFELTIT PDFQWDDKVH GYVEPFWVIV
EDNDGENILH HEYFMVKKQY VDEDHTLNFT VPIYEPLPPQ YFIRVVSDKW LGSQTILPVC
FRHLILPEKY APPTELLDLQ PLPVTALRNA RYEGLYSAFK HFNPIQTQVF TVLYNTDDSV
LVAAPTGSGK TICAEFAILR NHQKAVSGES NMRVVYIAPI EALAKERYRD WEQKFGEFAR
VVELTGETAA DLKLLDKGEI IISTPEKWDA LSRRWKQRKQ VQQVSLFIVD ELHLIGSEKG
HVLEVIVSRM RRIASHIGSN IRIVALSASL ANAKDLGEWI GATSHGLFNF PPAVRPVPLE
IHIQGVDIAN FEARMQAMTK PTYTAITQHA KNGKPALVFV PTRKHARLTA LDLCAYSSAE
GGGTPFLLGS EDEMDAFIGG ISDETLKYTL KCGVGYLHEG LSDLEQEVVT QLFLGGRIQV
CVASSTVCWG RSLPAHLVVV MGTQYYDGRE NAHTDYPITD LLQMMGHASR PLQDNSGKCV
ILCHAPRKEY YKKFLFEAFP VESHLHHFLH DHMNAEVVVG VIENKQDAVD YLTWTFMYRR
LTKNPNYYNL QGVSHRHLSD HLSELVETVL NDLESSKCVA IEEDMYLKPL NLGLIASYYY
ISYTTIERFS SMLTQKTKMK GLLEILASAS EYAELPSRPG EEDFIEKLVR HQRFSIEKPK
YGDPHVKANA LLQAHFSRHT ILGNLAADQR EILLSAHRLL QAMVDVISSN GWLTLALNAM
ELSQMVTQGM WDRDSVLLQL PHFTKELARR CQENEGRPIE SIFDLAEMSI DEMRDLLQQS
NPQLQDIIEF FKRFPNVDMA YEVREGDDIR AGDNVTVQVT LERDMTNLPS EVGPVHAPRY
PKPKEEGWWL VIGDSSTNQL LAIKRVALQK RARVKLEFTA ASEAGRKEYM IYLMSDSYLG
CDQEYEFTVD VMDAGGD
//
