ID I1PNQ5_ORYGL Unreviewed; 484 AA.
AC I1PNQ5;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=Nop domain-containing protein {ECO:0000259|PROSITE:PS51358};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA04G0182400.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA04G0182400.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the PRP31 family.
CC {ECO:0000256|ARBA:ARBA00005572}.
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DR AlphaFoldDB; I1PNQ5; -.
DR STRING; 4538.I1PNQ5; -.
DR EnsemblPlants; ORGLA04G0182400.1; ORGLA04G0182400.1; ORGLA04G0182400.
DR Gramene; ORGLA04G0182400.1; ORGLA04G0182400.1; ORGLA04G0182400.
DR eggNOG; KOG2574; Eukaryota.
DR HOGENOM; CLU_026337_2_1_1; -.
DR OMA; CACIGIE; -.
DR Proteomes; UP000007306; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000244; P:spliceosomal tri-snRNP complex assembly; IEA:InterPro.
DR Gene3D; 1.10.287.4070; -; 1.
DR Gene3D; 1.10.246.90; Nop domain; 1.
DR InterPro; IPR042239; Nop_C.
DR InterPro; IPR002687; Nop_dom.
DR InterPro; IPR036070; Nop_dom_sf.
DR InterPro; IPR012976; NOSIC.
DR InterPro; IPR027105; Prp31.
DR InterPro; IPR019175; Prp31_C.
DR PANTHER; PTHR13904; PRE-MRNA SPLICING FACTOR PRP31; 1.
DR PANTHER; PTHR13904:SF0; U4_U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP31; 1.
DR Pfam; PF01798; Nop; 1.
DR Pfam; PF09785; Prp31_C; 1.
DR SMART; SM00931; NOSIC; 1.
DR SUPFAM; SSF89124; Nop domain; 1.
DR PROSITE; PS51358; NOP; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 216..334
FT /note="Nop"
FT /evidence="ECO:0000259|PROSITE:PS51358"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 332..360
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..40
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 484 AA; 52748 MW; A888AA7A138B9BBC CRC64;
MASLADSFLA DLDELSDNEA YPEEENAEAV GTEEIGDDDM PDLESLNYDD LDSVSKLQKT
QRYNDIMQKV ENALQKGTDF SNQGSILEED PEYQLIVDCN ALSVDIENEI IIIHNFIRDK
YRLKFPELES LVHHPIDYAR VVQKIGNEMD LTLVDLEGLL PSAIIMVISV TASTTSGKPL
SEENLVKTIE ACERALTLDA AKKKVLEFVE SRMGYIAPNL STIVGSAVAS KLMGTAGGLG
ALAKMPACNV QLLGAKRKNL AGFSTATSQF RVGYLEQTDV FQSTPPALRT RACRLIAAKS
TLAARIDSIR GDPTGKAGRN LLEEIRKKIE KWQEPPPAKL PKPLPVPDFE PKKKRGGRRL
RKMKERYAQT DMMKLANRMQ FGVPEESSLG DGLGEGYGML GQAGSGKLRV STAPSKLSAK
ITKKFKEKSY GSSGATSGLT SSLAFTPVQG IELSNPQAHG NLLGSGTQST YFSETGTFSK
IKRT
//
