ID I1Q1W6_ORYGL Unreviewed; 662 AA.
AC I1Q1W6;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE RecName: Full=PHD-type domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA06G0112900.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA06G0112900.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; I1Q1W6; -.
DR STRING; 4538.I1Q1W6; -.
DR EnsemblPlants; ORGLA06G0112900.1; ORGLA06G0112900.1; ORGLA06G0112900.
DR Gramene; ORGLA06G0112900.1; ORGLA06G0112900.1; ORGLA06G0112900.
DR eggNOG; ENOG502QT38; Eukaryota.
DR HOGENOM; CLU_022156_0_0_1; -.
DR OMA; KCYFPDD; -.
DR Proteomes; UP000007306; Unassembled WGS sequence.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd04370; BAH; 1.
DR CDD; cd15489; PHD_SF; 1.
DR Gene3D; 2.30.30.490; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR47527:SF6; OS06G0309000 PROTEIN; 1.
DR PANTHER; PTHR47527; RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN; 1.
DR Pfam; PF01426; BAH; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00439; BAH; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS51038; BAH; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 315..368
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 538..661
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT REGION 396..472
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 396..432
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 662 AA; 71671 MW; 479A6DDFE544A233 CRC64;
MGSGRERKRR RRGEMGRVAE MVMVLAAAGQ ARGGGAPTAA ERALAAVARE RLLEAAELLA
RPRELFPREA VRALVEDLGL ARGRDPSAMG YRPRRASIAE RILLTKRKME EIKEAPVYPT
TNVSQTTATR ATTVFQHGAS KPTIGLPMNI SAVASFPVTT PPTIPSPNIL KQTQLNESPS
GVKAAGTSSI VSVPSVGPTN IKVEKGVNSP TCTQNGATIG QANKSAHLTA TMSNPNIVRS
SSHEGTPQHE KAPVIRPITV KNGMTHQSRP GVSFIQRQST FPNHSAIAKT VQQVLHQPVN
HPNWIPPSTE YMRSGLGCQV CKVFIIDIHS MIICDACERG IHLKCLQHDG VNVLPPKAEW
YCPTCVARSK GKPLPPKYGK VTRTVVAPKV NLISGVPSQG VSENRTTKDN NQELAADGTV
IDKNSSEANR IVHNSDKLAL ESSKEQSQSG SASAAVDKGR GKPQGVGTME NNAISERGNV
HELTSNGDLS TKNEIVIGDA KDKTIVCSTD HSIVGWVGDP LRVVENKTYY YSCNIDGIAY
NLDDHILVAS KDKESAPSKL QSLWEEHDSR SKMALVSPYF FASDIPELIS KPCTAEENEV
FASCNQRTVT VSAICGQCEV LHVDKFREET KGSQVVSSRL HPIFLCRWKY DESTSSFSSV
NN
//
