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Database: UniProt
Entry: I1QV54_ORYGL
LinkDB: I1QV54_ORYGL
Original site: I1QV54_ORYGL 
ID   I1QV54_ORYGL            Unreviewed;      1323 AA.
AC   I1QV54;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   24-JAN-2024, entry version 42.
DE   RecName: Full=ATP-dependent DNA helicase {ECO:0000256|RuleBase:RU363044};
DE            EC=3.6.4.12 {ECO:0000256|RuleBase:RU363044};
OS   Oryza glaberrima (African rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA10G0108700.1, ECO:0000313|Proteomes:UP000007306};
RN   [1] {ECO:0000313|Proteomes:UP000007306}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA   Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA   Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA   Zuccolo A.;
RT   "The complete genome of Oryza glaberrima.";
RL   Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:ORGLA10G0108700.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC         ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC         Evidence={ECO:0000256|RuleBase:RU363044};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000256|RuleBase:RU363044};
CC   -!- SIMILARITY: Belongs to the helicase family.
CC       {ECO:0000256|RuleBase:RU363044}.
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DR   STRING; 4538.I1QV54; -.
DR   EnsemblPlants; ORGLA10G0108700.1; ORGLA10G0108700.1; ORGLA10G0108700.
DR   Gramene; ORGLA10G0108700.1; ORGLA10G0108700.1; ORGLA10G0108700.
DR   eggNOG; KOG0987; Eukaryota.
DR   HOGENOM; CLU_001324_0_0_1; -.
DR   OMA; CNGTRMQ; -.
DR   Proteomes; UP000007306; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR   GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR   GO; GO:0000723; P:telomere maintenance; IEA:InterPro.
DR   CDD; cd18809; SF1_C_RecD; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR010285; DNA_helicase_pif1-like.
DR   InterPro; IPR025476; Helitron_helicase-like.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR049163; Pif1-like_2B_dom.
DR   PANTHER; PTHR10492:SF78; ATP-DEPENDENT DNA HELICASE; 1.
DR   PANTHER; PTHR10492; UNCHARACTERIZED; 1.
DR   Pfam; PF14214; Helitron_like_N; 1.
DR   Pfam; PF05970; PIF1; 1.
DR   Pfam; PF21530; Pif1_2B_dom; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|RuleBase:RU363044};
KW   DNA damage {ECO:0000256|RuleBase:RU363044};
KW   DNA recombination {ECO:0000256|RuleBase:RU363044};
KW   DNA repair {ECO:0000256|RuleBase:RU363044};
KW   Helicase {ECO:0000256|RuleBase:RU363044};
KW   Hydrolase {ECO:0000256|RuleBase:RU363044};
KW   Nucleotide-binding {ECO:0000256|RuleBase:RU363044}.
FT   DOMAIN          270..434
FT                   /note="Helitron helicase-like"
FT                   /evidence="ECO:0000259|Pfam:PF14214"
FT   DOMAIN          1162..1208
FT                   /note="DNA helicase Pif1-like 2B"
FT                   /evidence="ECO:0000259|Pfam:PF21530"
SQ   SEQUENCE   1323 AA;  152443 MW;  5E21415A0A952494 CRC64;
     KQPSFSRQRK NQPSFGLCCK QGKVALPPLK EPPHFLSSLL ARDGGTSENY QQNIRSYNSM
     FAFTSMGGAV DRKINKGRGP YVFRLNGQNY HHIGTLLPKG SNKPRFQQLY IYDTENEIKN
     RIEASRSGTR NASLDEKTIA GLLTMLDENN TLAQTFRMAR ERFKEDDYHN YTLRLLDNRD
     QDGRQNNMPS TSEVAMLIVK DPTEKSYGRD IVLEYKDMRP KRISETHPKF MAMQYPLLFP
     YGEDGYRLGI KYSGKDGVRY DKKCVTMREY YAYRLQQRQD QSMLPLACGN LSMQFMVDAY
     TCIEQCRLSW IRQNQGILRT ELYGGLQDAL RTGDTRTEKL GRRIVLPASF TGGPRNKEQN
     YQDAMAICRW AGNPDLFVTF TCNPKWPEIQ CMLEKVGHQK PSERPDIVVR VFMIKLRELM
     SDIKRNQHFG KTKAKTNPKS PCMVDHKCDR YFPKGFSDET IIDEVNFPIY KRRDDGRQIK
     KGRINLNNGF VVPYNKDLLV KFQAHINVEW FNRSKSIRYL FKSIYNGDDQ ATAVVEETDT
     AKDNDEIKRY LGCSYMTATE ACWRIFTFPL HYQEPSVQRL FFHVENEQQV IFPDSTDLQE
     IIRHPRSGVT MFTEWMETNK KHEDARELTY SEFPTKWTWV NKVKKWVRRK GRKKIGRIYN
     AHPASGERYY LRVILNTAKG CTTFEDIRTV NGFVHSSYKS ACHALGFLND DNEWIECIKE
     ASCWASGIEL RQLFATILCH CEVTDPKSLW ESIWEELSKD IQHTQSWLLN FPASCLTPSH
     KRKCALIEIE KNMRQAGKSL KEYTGIEPPN VAKLSEIENS LINEEMNYDK ERLKHQHLQV
     LNTLNIEQKK AFDAIIESAH QSLGKLIFVD GYGGTGKTYL WKAITTRLRS EGKIVIAVAS
     SGIAALLLQG GRTAHSAFNI PINLTDESTC FIKQGSRIAD LLMKTSLILW DEAPMANRNC
     FEALDKSLRD VQRFRNENSY QKPFGGMTVV LGGDFRQILP IVPKGRREHT VNASIKFSYL
     WQHFEVFNLT KNMRLNSVSK DQAEHQKTAE FAEWILRIGN GDTILLDEKG WVSMPSDLLL
     QKGDDPKAQI VDSTYPGLQY NCCKPKYLEE RAILCPTNDD VNELNEYIMD QIQGDKVTYL
     SHDSVSKSMS YSHEMEMLYP TEFLNSLKHP GIPNHQLKLK VGLPVMLLRN INQNAGLCNG
     TRMRITRFGK RVIEAEIITG THIGDMVCIP QIIMSPNERK WPFVLNRKQF PLSVCFAMTI
     NKSQGQTLNK VGLYLPRQVF THGQLYVAVS RVTSRDGLKI MITDEECPGE GMVKNIVYKE
     IFQ
//
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