ID I2B3Z7_SHIBC Unreviewed; 392 AA.
AC I2B3Z7; K6UR40;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2012, sequence version 1.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=DNA-binding transcriptional activator {ECO:0000313|EMBL:AFJ45251.1};
GN Name=xylR {ECO:0000313|EMBL:AFJ45251.1};
GN OrderedLocusNames=EBL_c01150 {ECO:0000313|EMBL:AFJ45251.1};
OS Shimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 /
OS CDC 9005-74) (Escherichia blattae).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Shimwellia.
OX NCBI_TaxID=630626 {ECO:0000313|EMBL:AFJ45251.1, ECO:0000313|Proteomes:UP000001955};
RN [1] {ECO:0000313|EMBL:AFJ45251.1, ECO:0000313|Proteomes:UP000001955}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74
RC {ECO:0000313|Proteomes:UP000001955};
RX PubMed=22843577; DOI=10.1128/JB.00829-12;
RA Brzuszkiewicz E., Waschkowitz T., Wiezer A., Daniel R.;
RT "Complete genome sequence of the B12-producing Shimwellia blattae strain
RT DSM 4481, isolated from a cockroach.";
RL J. Bacteriol. 194:4436-4436(2012).
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DR EMBL; CP001560; AFJ45251.1; -; Genomic_DNA.
DR RefSeq; WP_002440689.1; NZ_BAHA01000007.1.
DR AlphaFoldDB; I2B3Z7; -.
DR STRING; 630626.EBL_c01150; -.
DR KEGG; ebt:EBL_c01150; -.
DR PATRIC; fig|630626.3.peg.119; -.
DR eggNOG; COG1609; Bacteria.
DR eggNOG; COG2207; Bacteria.
DR HOGENOM; CLU_042405_1_0_6; -.
DR OrthoDB; 8766450at2; -.
DR Proteomes; UP000001955; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd01543; PBP1_XylR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF24; XYLOSE OPERON REGULATORY PROTEIN; 1.
DR Pfam; PF12833; HTH_18; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:AFJ45251.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001955};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 288..386
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 392 AA; 44446 MW; CB65EB47614BB05A CRC64;
MHEKRHRITL LFNANKAYDR QVIEGVGEYL QASQLGWDIF MEEDFRTRLD TIGEWLGDGV
IADFDDKEIE SLLRATGVPI VGVGGSYHRP EDYPPVHYIA TDNHQLVNSA FLHLKEKGIN
RFAFYGLPAS SGKRWAAERE HAFRQIVASE AYPGAVYQGL ETTPDNWQHA QNRLADWIQT
LPPQTGIIAV TDARARHLLQ VCDNLHLPVP EKLPVIGIDN EEMIRYLSRV ALSSVAQGTR
QMGYQAAKLL HRLLNNEQLP LQRILVPPAR VIERRSTDYR SLCDPAVIQA MHYIRNHACK
GIKVEQVLDA VGISRSNLEK RFKEEVGETI HAIIHNEKLE RARSLISSTS LSLSEISQMC
GYPSLQYFYS VFKKAYGITP GEHRGKNSEI NE
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