ID I3C9Y3_9FLAO Unreviewed; 243 AA.
AC I3C9Y3;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2012, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=Helix-turn-helix protein {ECO:0000313|EMBL:EIJ40426.1};
GN ORFNames=JoomaDRAFT_3484 {ECO:0000313|EMBL:EIJ40426.1};
OS Galbibacter orientalis DSM 19592.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Galbibacter.
OX NCBI_TaxID=926559 {ECO:0000313|EMBL:EIJ40426.1, ECO:0000313|Proteomes:UP000004690};
RN [1] {ECO:0000313|EMBL:EIJ40426.1, ECO:0000313|Proteomes:UP000004690}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 19592 {ECO:0000313|EMBL:EIJ40426.1,
RC ECO:0000313|Proteomes:UP000004690};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA Peters L., Chertkov O., Ovchinnikova G., Kyrpides N., Mavromatis K.,
RA Detter J.C., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Tindall B., Brambilla E., Klenk H.-P.,
RA Eisen J.A.;
RT "Improved High-Quality Draft genome of Joostella marina DSM 19592.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; JH651379; EIJ40426.1; -; Genomic_DNA.
DR AlphaFoldDB; I3C9Y3; -.
DR STRING; 926559.JoomaDRAFT_3484; -.
DR eggNOG; COG3620; Bacteria.
DR HOGENOM; CLU_099806_0_0_10; -.
DR Proteomes; UP000004690; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR019109; DUF4870.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF09685; DUF4870; 1.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000004690};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 148..167
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 179..199
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 205..226
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 57..110
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 243 AA; 27880 MW; DD5A9B1ABED78856 CRC64;
MGLTKGRCKF TTSDFPRGNS SQICYLRFTV ENPHGFSCNK IIAKYVGGNL KQNMSKLKTL
REQQNLTQEE LSEKSGISAR TIQRIETGKE PKGFTLRALA KALEIAENEL IYTEIKQEKI
EANKIKKEPQ EVVLINYSFL KIINLSSIPF ILIPPLNIII PLVLMFIMKQ KNSLTKQLIS
LQILWTILAP IVFMLGIFLK LGNQFSLILM ILIVLSNVFI IIRNAIEIDK RKKLYYKLNF
NMI
//
