GenomeNet

Database: UniProt
Entry: I3K8D0_ORENI
LinkDB: I3K8D0_ORENI
Original site: I3K8D0_ORENI 
ID   I3K8D0_ORENI            Unreviewed;       657 AA.
AC   I3K8D0;
DT   11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT   17-JUN-2020, sequence version 2.
DT   24-JAN-2024, entry version 63.
DE   SubName: Full=PR/SET domain 6 {ECO:0000313|Ensembl:ENSONIP00000017375.2};
GN   Name=PRDM6 {ECO:0000313|Ensembl:ENSONIP00000017375.2};
OS   Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids;
OC   Pseudocrenilabrinae; Oreochromini; Oreochromis.
OX   NCBI_TaxID=8128 {ECO:0000313|Ensembl:ENSONIP00000017375.2, ECO:0000313|Proteomes:UP000005207};
RN   [1] {ECO:0000313|Proteomes:UP000005207}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG   Broad Institute Genome Assembly Team;
RG   Broad Institute Sequencing Platform;
RA   Di Palma F., Johnson J., Lander E.S., Lindblad-Toh K.;
RT   "The Genome Sequence of Oreochromis niloticus (Nile Tilapia).";
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSONIP00000017375.2}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   RefSeq; XP_003444552.1; XM_003444504.3.
DR   AlphaFoldDB; I3K8D0; -.
DR   STRING; 8128.ENSONIP00000017375; -.
DR   Ensembl; ENSONIT00000017390.2; ENSONIP00000017375.2; ENSONIG00000013818.2.
DR   GeneID; 100709871; -.
DR   KEGG; onl:100709871; -.
DR   CTD; 93166; -.
DR   eggNOG; KOG1721; Eukaryota.
DR   eggNOG; KOG2461; Eukaryota.
DR   GeneTree; ENSGT00940000155852; -.
DR   HOGENOM; CLU_032452_0_0_1; -.
DR   InParanoid; I3K8D0; -.
DR   OMA; AARYRCT; -.
DR   OrthoDB; 5342037at2759; -.
DR   TreeFam; TF106403; -.
DR   Proteomes; UP000005207; Linkage group LG12.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0042054; F:histone methyltransferase activity; IEA:InterPro.
DR   GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR   CDD; cd19191; PR-SET_PRDM6; 1.
DR   Gene3D; 3.30.160.60; Classic Zinc Finger; 3.
DR   Gene3D; 2.170.270.10; SET domain; 1.
DR   InterPro; IPR044416; PRDM6_PR-SET.
DR   InterPro; IPR001214; SET_dom.
DR   InterPro; IPR046341; SET_dom_sf.
DR   InterPro; IPR036236; Znf_C2H2_sf.
DR   InterPro; IPR013087; Znf_C2H2_type.
DR   PANTHER; PTHR16515:SF22; HISTONE-LYSINE N-METHYLTRANSFERASE PRDM6-RELATED; 1.
DR   PANTHER; PTHR16515; PR DOMAIN ZINC FINGER PROTEIN; 1.
DR   Pfam; PF21549; PRDM2_PR; 1.
DR   Pfam; PF00096; zf-C2H2; 3.
DR   SMART; SM00317; SET; 1.
DR   SMART; SM00355; ZnF_C2H2; 4.
DR   SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 2.
DR   SUPFAM; SSF82199; SET domain; 1.
DR   PROSITE; PS50280; SET; 1.
DR   PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR   PROSITE; PS50157; ZINC_FINGER_C2H2_2; 4.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005207};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT   DOMAIN          295..414
FT                   /note="SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50280"
FT   DOMAIN          535..562
FT                   /note="C2H2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50157"
FT   DOMAIN          563..590
FT                   /note="C2H2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50157"
FT   DOMAIN          591..618
FT                   /note="C2H2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50157"
FT   DOMAIN          619..646
FT                   /note="C2H2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50157"
FT   REGION          30..50
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          451..477
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        33..48
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   657 AA;  70318 MW;  E9666FEB3B66D50C CRC64;
     MLKPGDPSGS AFLKVDPSYL QHWQQLFPQA QLKAPLAPPP PPPDRLSIPI DTVRPSRLHS
     HLLASTHCTS SSSSSTSSSS AASSSAAAAA AAAAAAAAAA LTPSTSISIS TNAGLSQLPV
     PQQIALFGQA LAPVCAGPGG PGGGGGGPGG GGGGDLVVVV PPENPQGLNP AAGLLHQAKE
     QSCGGVGVGV VSSSVKSSSS GGSSEEGGKG TVTRFKLTAE ELDYYLYGQQ RMEIIPLSNH
     TGELNNRCDM CADNRNGECP MHGPLHSLRR LVGTSSTAAP VTLPDIPDWL RDLPREVCLC
     TSTVPGLGYG ICAAQRIPQG TWIGPFQGVP LMLEKAQSGV VRNTRHLWEI YDSEGTLQHF
     IDGNDPSKSS WMRYIRCARH CGEQNMMVVQ YRSCIFYRAC MDIPRGTELL VWYNDSYTSF
     FGIPLQCIAQ DENLNVPATV VEAMTRQESL QSFSKNGKPS SSSSSSSSSS TPSSTLMRSM
     VFPHSPCPRS FSLLDKVGVQ SDSSFGQLGS KNQRVLASPT STSQLSSEFS DWHLWKCGQC
     FKTFTQRILL QMHVCPQNPD RPYQCGHCSQ SFSQPSELRN HVVTHSSDRP FKCGYCGRAF
     AGATTLNNHI RTHTGEKPFK CERCDRSFTQ ATQLSRHQRL PNECKPVNET SESIEVD
//
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