ID I3KK82_ORENI Unreviewed; 250 AA.
AC I3KK82;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 2.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=RNA-binding protein 38 {ECO:0000256|ARBA:ARBA00039528};
DE AltName: Full=RNA-binding motif protein 38 {ECO:0000256|ARBA:ARBA00041483};
GN Name=LOC100705386 {ECO:0000313|Ensembl:ENSONIP00000021527.2};
OS Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids;
OC Pseudocrenilabrinae; Oreochromini; Oreochromis.
OX NCBI_TaxID=8128 {ECO:0000313|Ensembl:ENSONIP00000021527.2, ECO:0000313|Proteomes:UP000005207};
RN [1] {ECO:0000313|Proteomes:UP000005207}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG Broad Institute Genome Assembly Team;
RG Broad Institute Sequencing Platform;
RA Di Palma F., Johnson J., Lander E.S., Lindblad-Toh K.;
RT "The Genome Sequence of Oreochromis niloticus (Nile Tilapia).";
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSONIP00000021527.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC {ECO:0000256|ARBA:ARBA00004514}. Nucleus
CC {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the RBM38 family.
CC {ECO:0000256|ARBA:ARBA00038117}.
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DR RefSeq; XP_003438853.1; XM_003438805.4.
DR AlphaFoldDB; I3KK82; -.
DR STRING; 8128.ENSONIP00000021527; -.
DR Ensembl; ENSONIT00000021546.2; ENSONIP00000021527.2; ENSONIG00000017073.2.
DR GeneID; 100705386; -.
DR KEGG; onl:100705386; -.
DR CTD; 55544; -.
DR eggNOG; KOG0149; Eukaryota.
DR GeneTree; ENSGT00940000158489; -.
DR HOGENOM; CLU_065652_0_1_1; -.
DR InParanoid; I3KK82; -.
DR OMA; MPPTMEK; -.
DR OrthoDB; 5342376at2759; -.
DR TreeFam; TF314235; -.
DR Proteomes; UP000005207; Linkage group LG20.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12384; RRM_RBM24_RBM38_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR48024; GEO13361P1-RELATED; 1.
DR PANTHER; PTHR48024:SF28; RNA-BINDING PROTEIN 38; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW mRNA processing {ECO:0000256|ARBA:ARBA00023187};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000005207};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 29..106
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
SQ SEQUENCE 250 AA; 27139 MW; A9C4B8864B7F6DF8 CRC64;
MSSPLFLGQL VGVPLEIMHP TMEKDTTYTK IFVGGLPYHT NDASLRKYFE TFGDIDEAVV
ITDKQTGKSR GYGFVTMVDR GAAERACKDA NPIIDGRKAN VNLAYLGAKP RSSQSSLSVG
VQQVHPTWAQ RQYGLTQQYV YPQTFLQPSL LLHSHLSPTA AALTSPYLDY SPAYTPYAST
GLEQYPYTPS PSPSAGYLSY TFSPSTPAPT ITASPTPPAA IHPPLAALTA VSAAPQAFLH
YPLHQPDRMQ
//
