ID I3MAM4_ICTTR Unreviewed; 314 AA.
AC I3MAM4;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 2.
DT 27-MAR-2024, entry version 51.
DE RecName: Full=Protein YIPF {ECO:0000256|RuleBase:RU361264};
GN Name=YIPF2 {ECO:0000313|Ensembl:ENSSTOP00000007068.3};
OS Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus
OS tridecemlineatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae;
OC Xerinae; Marmotini; Ictidomys.
OX NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000007068.3, ECO:0000313|Proteomes:UP000005215};
RN [1] {ECO:0000313|Proteomes:UP000005215}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG The Broad Institute Genome Assembly & Analysis Group;
RG Computational R&D Group;
RG and Sequencing Platform;
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lindblad-Toh K.;
RT "The Draft Genome of Spermophilus tridecemlineatus.";
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSSTOP00000007068.3}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Endosome membrane
CC {ECO:0000256|ARBA:ARBA00004608}. Golgi apparatus membrane
CC {ECO:0000256|RuleBase:RU361264}; Multi-pass membrane protein
CC {ECO:0000256|RuleBase:RU361264}. Golgi apparatus, cis-Golgi network
CC membrane {ECO:0000256|ARBA:ARBA00004257}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004257}. Golgi apparatus, trans-Golgi network
CC membrane {ECO:0000256|ARBA:ARBA00004198}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the YIP1 family. {ECO:0000256|ARBA:ARBA00010596,
CC ECO:0000256|RuleBase:RU361264}.
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DR EMBL; AGTP01088396; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_005336209.1; XM_005336152.2.
DR RefSeq; XP_013218789.1; XM_013363335.1.
DR AlphaFoldDB; I3MAM4; -.
DR STRING; 43179.ENSSTOP00000007068; -.
DR Ensembl; ENSSTOT00000007899.3; ENSSTOP00000007068.3; ENSSTOG00000007905.3.
DR GeneID; 101970394; -.
DR CTD; 78992; -.
DR eggNOG; KOG3114; Eukaryota.
DR GeneTree; ENSGT00390000010157; -.
DR HOGENOM; CLU_059606_1_1_1; -.
DR InParanoid; I3MAM4; -.
DR OrthoDB; 8905at2759; -.
DR TreeFam; TF313536; -.
DR Proteomes; UP000005215; Unassembled WGS sequence.
DR GO; GO:0005797; C:Golgi medial cisterna; IEA:Ensembl.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0000138; C:Golgi trans cisterna; IEA:Ensembl.
DR GO; GO:0005802; C:trans-Golgi network; IEA:Ensembl.
DR GO; GO:0030133; C:transport vesicle; IEA:Ensembl.
DR GO; GO:0031267; F:small GTPase binding; IEA:InterPro.
DR GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR InterPro; IPR006977; Yip1_dom.
DR InterPro; IPR039765; Yip5/YIPF1/YIPF2.
DR PANTHER; PTHR12822:SF3; PROTEIN YIPF2; 1.
DR PANTHER; PTHR12822; UNCHARACTERIZED; 1.
DR Pfam; PF04893; Yip1; 1.
PE 3: Inferred from homology;
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU361264};
KW Reference proteome {ECO:0000313|Proteomes:UP000005215};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW ECO:0000256|RuleBase:RU361264};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|RuleBase:RU361264}.
FT TRANSMEM 119..142
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT TRANSMEM 162..182
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT TRANSMEM 203..221
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT TRANSMEM 227..248
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT TRANSMEM 255..279
FT /note="Helical"
FT /evidence="ECO:0000256|RuleBase:RU361264"
FT DOMAIN 100..272
FT /note="Yip1"
FT /evidence="ECO:0000259|Pfam:PF04893"
SQ SEQUENCE 314 AA; 34981 MW; 987E4EC58ED47FAD CRC64;
MAAADGLAFH EFEEATNLLA ETPDAATTSK SDQLTPKGHV VVAVGSGGSY GVEEEVEEEG
DKTALLQEEK PQPGFWTFSY YQSFFDVDTS QVLDRIKGSL LPWPGHNFVR HHLRNRPDLY
GPFWICATLA FVLAVTGNLT LVLAQRRDPS VHYSPQFHKV TVAGITIYCY AWLVPLALWG
FLRWRKGIRE RMGPYTFLET VCIYGYSLFV FIPTVVLWLI PVPWLQWLFG ALALTLSAAG
LVFTLWPVVR EDTRLVAAVL LSTVVVLHAL LAMGCKLYFF QPLPPEHIAP PSQATSLPPN
ILLTPTMTRS MATS
//
