ID I3MKF1_ICTTR Unreviewed; 549 AA.
AC I3MKF1;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2012, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=Tigger transposable element derived 7 {ECO:0000313|Ensembl:ENSSTOP00000011759.1};
GN Name=TIGD7 {ECO:0000313|Ensembl:ENSSTOP00000011759.1};
OS Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus
OS tridecemlineatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae;
OC Xerinae; Marmotini; Ictidomys.
OX NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000011759.1, ECO:0000313|Proteomes:UP000005215};
RN [1] {ECO:0000313|Proteomes:UP000005215}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG The Broad Institute Genome Assembly & Analysis Group;
RG Computational R&D Group;
RG and Sequencing Platform;
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lindblad-Toh K.;
RT "The Draft Genome of Spermophilus tridecemlineatus.";
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSSTOP00000011759.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00320}.
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DR EMBL; AGTP01095321; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_005337808.1; XM_005337751.2.
DR RefSeq; XP_013219475.1; XM_013364021.1.
DR AlphaFoldDB; I3MKF1; -.
DR STRING; 43179.ENSSTOP00000011759; -.
DR Ensembl; ENSSTOT00000013118.1; ENSSTOP00000011759.1; ENSSTOG00000013125.1.
DR GeneID; 101977874; -.
DR CTD; 91151; -.
DR eggNOG; KOG3105; Eukaryota.
DR GeneTree; ENSGT00940000163295; -.
DR HOGENOM; CLU_018294_1_1_1; -.
DR InParanoid; I3MKF1; -.
DR OMA; WFTRESF; -.
DR OrthoDB; 2967227at2759; -.
DR TreeFam; TF101131; -.
DR Proteomes; UP000005215; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR006600; HTH_CenpB_DNA-bd_dom.
DR InterPro; IPR007889; HTH_Psq.
DR PANTHER; PTHR19303:SF17; TIGGER TRANSPOSABLE ELEMENT-DERIVED PROTEIN 7; 1.
DR PANTHER; PTHR19303; TRANSPOSON; 1.
DR Pfam; PF04218; CENP-B_N; 1.
DR Pfam; PF03184; DDE_1; 1.
DR Pfam; PF03221; HTH_Tnp_Tc5; 1.
DR SMART; SM00674; CENPB; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51253; HTH_CENPB; 1.
DR PROSITE; PS50960; HTH_PSQ; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00320};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00320};
KW Reference proteome {ECO:0000313|Proteomes:UP000005215}.
FT DOMAIN 1..52
FT /note="HTH psq-type"
FT /evidence="ECO:0000259|PROSITE:PS50960"
FT DOMAIN 68..139
FT /note="HTH CENPB-type"
FT /evidence="ECO:0000259|PROSITE:PS51253"
FT DNA_BIND 28..48
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00320"
SQ SEQUENCE 549 AA; 63389 MW; 61D35C53D799841C CRC64;
MNKRGKYTTL NLEEKMKVLS RIEAGRSLKN VMDEFGISKS TFYDIKKNKK LILDFVLKQD
MPLVGAEKRK RTTGAKYSDV DDAVYMWYQQ KRSAGVPVRG VELQAAAERF AQCFGRTDFK
ASTGWLFRFR NRHAIGNRKV CGEQIVSSAS ENVEPFRQKL SLIIKEEKLH LAQVYSGDET
DLFWKSMPEN TQASRKDICL PGRKINKERL SALLCANADG THKLKSIIIG KLKLPKSVRE
DTSSLPVIYK PSKDAWFTRE LFSEWFFQNF VPEVRHFQIN VLRFHEEDVR ALLLLDSSPA
HPSAESLTSE DGRIKCMFFP HNSSTLIQPM NQGVTLSCKR LYRWKQLEES LVIFEESEDE
QDKGENGISK IKIYNIKNAV FNWARSWDEV KQITIVNAWE NLLYKKEPDY ALQGLESRDY
REILEKCGEL KTKVDDDKVW LNGVDEEKGC PPKTKGRITK GVAQREGIEK QATEFKLSAV
RESLDYLLDF VDATPEFQRF HSTLKEMQQE VVRKQFQSRI HSRIGSFLTP RPHNIKDTFN
MPSTSGSNH
//
